Construct Library Set

Changelog for construct_library_set.json

Minor changes since schema version 10

• Extend collections enum list to include IGVF_catalog_beta_v0.5.
• Extend selection_criteria enum list to include random selections.
• Extend selection_criteria enum list to include controls.
• Extend control_type enum list to include non-targeting.
• Extend status enum list to include preview.
• Add control_file_sets.
• Extend scope enum list to include control.
• Extend control_type enum list to include control transduction.
• Rename calculated property input_file_set_for to input_for.

Schema version 10

• Restrict linkTo for integrated_content_files to ReferenceFile and TabularFile.

Minor changes since schema version 9

• Extend collections enum list to include VarChAMP.
• Add control_type.

Schema version 9

• Remove publication_identifiers.

Minor changes since schema version 8

• Restrict publication_identifiers to submission by admins only.
• Add publications.
• Extend scope enum list to include alleles.
• Extend scope enum list to include targeton.
• Extend file_set_type enum list to include editing template library.
• Add targeton.
• Extend collections enum list to include Vista.
• Extend collections enum list to include IGVF_catalog_beta_v0.2.
• Extend collections enum list to include IGVF_catalog_beta_v0.3.
• Extend collections enum list to include IGVF_catalog_beta_v0.4.
• Add calculated property input_file_set_for.
• Add orf_list.
• Extend scope enum list to include interactors.

Schema version 8

• Restrict linkTo for integrated_content_files to ReferenceFile and TabularFile, other file types are submittable by admins only.

Schema version 7

• Require release_timestamp for any objects with released, archived, or revoked status.

Minor changes since schema version 6

• Update aliases regex to add buenrostro-bernstein as a namespace.

Schema version 6

• Remove hg19, mm10, and mm9 from assembly on small_scale_loci_list.

Schema version 5

• Remove genes and loci.

Minor changes since schema version 4

• Add MPRAbase to collections.
• Add ReferenceFile linkTo to large_scale_gene_list and large_scale_loci_list.
• Add calculated submitted_files_timestamp.

Schema version 4

• Add small_scale_gene_list, large_scale_gene_list, small_scale_loci_list, and large_scale_loci_list.
• Restrict genes and loci to submittable by admins only.

Minor changes since schema version 3

• Add a title property to tile.
• Allow underscores in the pattern for chromosome in loci.
• Add release_timestamp.

Schema version 3

• Disallow empty strings in description.

Schema version 2

• Add tile enum to file_set_type and descriptive tile property.
• Disallow empty strings in exon property.

Minor changes since schema version 1

• Add summary and applied_to_samples.
• Expand collections enum list to include ClinGen, GREGoR, IGVF_catalog_beta_v0.1, and MaveDB.