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Auxiliary Set

Schema Directory
Title
Auxiliary Set
Description
Auxiliary set is a file set that hosts raw data files (e.g. FASTQs) resulting from sequencing of nucleic acids of a sample that are a proxy to some vital information and necessary for the analysis of an associated measurement set. Auxiliary sets usually would not provide any information about the transcriptome or the genome of the sample in question. For example auxiliary sets would include the sequencing of barcodes that correspond to the elements introduced into cells, or sequencing of guide RNA coding sequences in the cells. The files hosted in the auxiliary sets are relevant for the analysis, but they by themselves are not assessing much of the biology of the sample being analyzed.
Required
award, file_set_type, lab
Identifying Properties
accession, aliases, alternate_accessions, uuid
Highlight properties with matching names, “title” attributes, or an enum of those properties. Matching properties might be non-submittable.
array[string]
Lab specific identifiers to reference an object.
linkto
Grant associated with the submission.
linkto
The link to the barcode mapping tabular file.
string
The type of control this file set represents.
array[string]
Identifiers from external resources that may have 1-to-1 or 1-to-many relationships with IGVF file sets.
string
A plain text description of the object.
array[linkto]
Documents that provide additional information (not data file).
string
The category that best describes this auxiliary file set.
linkto
Lab associated with the submission.
array[linkto]
The publications associated with this object.
array[linkto]
The sample(s) associated with this file set.
string
Additional information specified by the submitter to be displayed as a comment on the portal.
string
An external resource with additional information.