IGVFDS0257SDNV

released
File Set Type
functional effect
Summary
functional effect prediction on scope of loci
Description
Predictions of mutation effect at every base in ENCODE cCREs across hg38.
Scope
loci
Large Scale Loci List
Aliases
andrew-allen:bluestarr-prediction-set-v3

Files

2 items
bed
variant effects
GRCh38 predictive variant effects
Bill Majoros, Duke
58 MB
validated
bed
variant effects
GRCh38 predictive variant effects
Bill Majoros, Duke
1.8 GB
validated

File Association Graph

Loading…
File Set
File
CuratedSet
ModelSet
PredictionSet

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
virtual K562 cell line, female, Homo sapiens

Input File Sets

2 items
ModelSet
BlueSTARR-K562 v0.1.0 neural network predicting regulatory elements
  • andrew-allen:bluestarr-k562-model
  • bill-majoros:bluestarr-k562-model
Bill Majoros, Duke
CuratedSet
Homo sapiens GRCh38 elements
  • igvf:cCREs
ENCODE Project, NHGRI

Attribution

Award
Principal Investigator(s)
Contact P.I.
Lab