Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
PredictionSet
/
IGVFDS0257SDNV
IGVFDS0257SDNV
released
Json view
File Set Type
functional effect
Summary
functional effect prediction on scope of loci
Description
Predictions of mutation effect at every base in ENCODE cCREs across hg38.
Scope
loci
Large Scale Loci List
IGVFFI3932HEZL
Aliases
andrew-allen:bluestarr-prediction-set-v3
Files
2 items
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI1236SEPK
bed
variant effects
GRCh38 predictive variant effects
Bill Majoros, Duke
58 MB
validated
IGVFFI7272QBOC
bed
variant effects
GRCh38 predictive variant effects
Bill Majoros, Duke
1.8 GB
validated
File Association Graph
Loading…
File Set
File
CuratedSet
ModelSet
PredictionSet
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM7883WOIS
InVitroSystem
K562
virtual K562 cell line, female, Homo sapiens
Input File Sets
2 items
Accession
Type
Summary
Aliases
Lab
IGVFDS3627LKSF
ModelSet
BlueSTARR-K562 v0.1.0 neural network predicting regulatory elements
andrew-allen:bluestarr-k562-model
bill-majoros:bluestarr-k562-model
Bill Majoros, Duke
IGVFDS4146YLZU
CuratedSet
Homo sapiens GRCh38 elements
igvf:cCREs
ENCODE Project, NHGRI
Attribution
Award
HG011967
Principal Investigator(s)
Andrew Allen
,
David Page
,
Bill Majoros
Contact P.I.
Andrew Allen
Lab
Bill Majoros, Duke