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K562 — IGVFSM8645VILQ

released
Summary
multiplexed sample: Homo sapiens (male) HAP-1 cell line; Homo sapiens (male) HAP-1 cell line; ... and 13 more samples
Multiplexing Method
barcode based
Sources
Barcode Map
IGVFFI3653QRKF
Taxa
Homo sapiens
Aliases
ansuman-satpathy:multiplexed_sample_igvf1_10x2
Protocols
Attribution
Ansuman Satpathy, Stanford

Donors

5 items
Aliases
  • igvf:donor_of_HUDEP-2
unspecified
Homo sapiens
  • igvf:donor_of_HL-60
female
Homo sapiens
  • igvf:donor_of_HAP-1
male
Homo sapiens
  • igvf:donor_of_K562
female
Homo sapiens
  • igvf:donor_of_U2OS
female
Homo sapiens

File Sets

4 items
10x multiome with MULTI-seq: cell hashing barcodes, fragments, index, peaks, raw feature barcode matrix
  • ansuman-satpathy:igvf1_analysis_set_10x2
Ansuman Satpathy, Stanford
lipid-conjugated oligo sequencing for single-nucleus RNA sequencing assay (10x multiome with MULTI-seq), single-nucleus ATAC-seq (10x multiome with MULTI-seq)
  • ansuman-satpathy:multiseq_igvf1_10x2
Ansuman Satpathy, Stanford
single-nucleus RNA sequencing assay (10x multiome with MULTI-seq)
  • ansuman-satpathy:snRNA-seq_igvf1_10x2
Ansuman Satpathy, Stanford
single-nucleus ATAC-seq (10x multiome with MULTI-seq)
  • ansuman-satpathy:snATAC-seq_igvf1_10x2
Ansuman Satpathy, Stanford

Multiplexed Samples

15 items
Sample Terms
Summary
InVitroSystem
Homo sapiens (male) HAP-1 cell line
InVitroSystem
Homo sapiens (male) HAP-1 cell line
InVitroSystem
Homo sapiens HUDEP-2 cell line
InVitroSystem
Homo sapiens (female) U2OS cell line
InVitroSystem
Homo sapiens HUDEP-2 cell line
InVitroSystem
Homo sapiens (female) K562 cell line
InVitroSystem
Homo sapiens (female) K562 cell line
InVitroSystem
Homo sapiens (female) HL-60 cell line
InVitroSystem
Homo sapiens (female) HL-60 cell line
InVitroSystem
Homo sapiens (female) K562 cell line

Institutional Certificates

5 items
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