K562 — IGVFSM8645VILQ

released
Summary
multiplexed sample: HAP-1 cell line, male, Homo sapiens; HAP-1 cell line, male, Homo sapiens; ... and 13 more samples
Multiplexing Method
barcode based
Sources
Barcode Map
Taxa
Homo sapiens
Aliases
ansuman-satpathy:multiplexed_sample_igvf1_10x2
Protocols

Donors

5 items
Aliases
  • igvf:donor_of_HUDEP-2
unspecified
Homo sapiens
  • igvf:donor_of_HL-60
female
Homo sapiens
  • igvf:donor_of_HAP-1
male
Homo sapiens
  • igvf:donor_of_K562
female
Homo sapiens
  • igvf:donor_of_U2OS
female
Homo sapiens

File Sets

4 items
lipid-conjugated oligo sequencing for single-nucleus RNA sequencing assay (10x multiome with MULTI-seq), single-nucleus ATAC-seq (10x multiome with MULTI-seq)
  • ansuman-satpathy:multiseq_igvf1_10x2
Ansuman Satpathy, Stanford
single-nucleus RNA sequencing assay (10x multiome with MULTI-seq)
  • ansuman-satpathy:snRNA-seq_igvf1_10x2
Ansuman Satpathy, Stanford
single-nucleus ATAC-seq (10x multiome with MULTI-seq)
  • ansuman-satpathy:snATAC-seq_igvf1_10x2
Ansuman Satpathy, Stanford
10x multiome with MULTI-seq: cell hashing barcodes, fragments, index, peaks, raw feature barcode matrix
  • ansuman-satpathy:igvf1_analysis_set
Ansuman Satpathy, Stanford

Multiplexed Samples

15 items
Sample Terms
Summary
InVitroSystem
HAP-1 cell line, male, Homo sapiens
InVitroSystem
HAP-1 cell line, male, Homo sapiens
InVitroSystem
HUDEP-2 cell line, Homo sapiens
InVitroSystem
U2OS cell line, female, Homo sapiens
InVitroSystem
HUDEP-2 cell line, Homo sapiens
InVitroSystem
K562 cell line, female, Homo sapiens
InVitroSystem
K562 cell line, female, Homo sapiens
InVitroSystem
HL-60 cell line, female, Homo sapiens
InVitroSystem
HL-60 cell line, female, Homo sapiens
InVitroSystem
K562 cell line, female, Homo sapiens

Attribution

Award
Principal Investigator(s)
Contact P.I.
Lab