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putamen — IGVFSM7823HUBP

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This object is in preview status. Metadata is subject to change until this object is released.
Summary
multiplexed sample: Homo sapiens (female, 82 years) substantia nigra tissue associated with cerebral amyloid angiopathy; Homo sapiens (female, 84 years) cerebellar cortex tissue associated with Parkinson's disease, mild cognitive impairment; ... and 10 more samples
Multiplexing Method
genetic
Sources
Taxa
Homo sapiens
Aliases
igvf:corces_multiplexedSample_X039_G7

Donors

12 items
Aliases
  • igvf:corces_donor_BANN1569
male
Homo sapiens
  • igvf:corces_donor_BANN1584
male
Homo sapiens
  • igvf:corces_donor_BANN1170
male
Homo sapiens
  • igvf:corces_donor_BANN1256
female
Homo sapiens
  • igvf:corces_donor_BANN0322
female
Homo sapiens
  • igvf:corces_donor_BANN1865
male
Homo sapiens
  • igvf:corces_donor_BANN0124
male
Homo sapiens
  • igvf:corces_donor_BANN2118
female
Homo sapiens
  • igvf:corces_donor_BANN1201
male
Homo sapiens
  • igvf:corces_donor_BANN9902
female
Homo sapiens

File Sets

2 items
single-nucleus ATAC-seq (10x multiome)
  • igvf:corces_measurementSet_X039_G7_ATAC
Ryan Corces, Gladstone Institute UCSF
single-nucleus RNA sequencing assay (10x multiome)
  • igvf:corces_measurementSet_X039_G7_RNA
Ryan Corces, Gladstone Institute UCSF

Multiplexed Samples

12 items
Sample Terms
Disease Terms
Summary
Tissue
Homo sapiens (female, 82 years) substantia nigra tissue associated with cerebral amyloid angiopathy
Tissue
Homo sapiens (female, 84 years) cerebellar cortex tissue associated with Parkinson's disease, mild cognitive impairment
Tissue
Homo sapiens (female, 70 years) posterior cingulate gyrus tissue associated with cerebral amyloid angiopathy
Tissue
Homo sapiens (female, 86 years) posterior cingulate gyrus tissue associated with Parkinson's disease
Tissue
Homo sapiens (male, 81 years) middle temporal gyrus tissue associated with Parkinson's disease, mild cognitive impairment
Tissue
Homo sapiens (male, 85 years) posterior cingulate gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy
Tissue
Homo sapiens (male, 80 years) middle temporal gyrus tissue associated with Parkinson's disease
Tissue
Homo sapiens (male, 80 years) substantia nigra tissue associated with Parkinson's disease, cerebral amyloid angiopathy
Tissue
Homo sapiens (female, 70 years) cerebellar cortex tissue associated with Parkinson's disease
Tissue
Homo sapiens (male, 80 years) middle temporal gyrus tissue

Attribution

Award
HG012076
Principal Investigator(s)
Contact P.I.
Ansuman Satpathy
Lab
Ryan Corces, Gladstone Institute UCSF