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putamen — IGVFSM6509YCTF

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This object is in preview status. Metadata is subject to change until this object is released.
Summary
multiplexed sample: Homo sapiens (male, 70 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (male, 78 years) putamen tissue associated with Parkinson's disease, mild cognitive impairment; ... and 12 more samples
Multiplexing Method
genetic
Sources
Taxa
Homo sapiens
Aliases
igvf:corces_multiplexedSample_RP010_G8

Donors

14 items
Aliases
  • igvf:corces_donor_BANN1973
male
Homo sapiens
  • igvf:corces_donor_BANN1809
male
Homo sapiens
  • igvf:corces_donor_BANN1256
female
Homo sapiens
  • igvf:corces_donor_BANN1719
female
Homo sapiens
  • igvf:corces_donor_BANN1070
male
Homo sapiens
  • igvf:corces_donor_BANN0919
male
Homo sapiens
  • igvf:corces_donor_BANN1830
female
Homo sapiens
  • igvf:corces_donor_BANN0912
male
Homo sapiens
  • igvf:corces_donor_BANN9917
female
Homo sapiens
  • igvf:corces_donor_BANN1639
male
Homo sapiens

File Sets

2 items
single-nucleus ATAC-seq (10x multiome)
  • igvf:corces_measurementSet_RP010_G8_ATAC
Ryan Corces, Gladstone Institute UCSF
single-nucleus RNA sequencing assay (10x multiome)
  • igvf:corces_measurementSet_RP010_G8_RNA
Ryan Corces, Gladstone Institute UCSF

Multiplexed Samples

14 items
Sample Terms
Disease Terms
Summary
Tissue
Homo sapiens (male, 70 years) substantia nigra tissue associated with Parkinson's disease
Tissue
Homo sapiens (male, 78 years) putamen tissue associated with Parkinson's disease, mild cognitive impairment
Tissue
Homo sapiens (male, 75 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy
Tissue
Homo sapiens (male, 90 or above years) posterior cingulate gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy
Tissue
Homo sapiens (female, 75 years) posterior cingulate gyrus tissue
Tissue
Homo sapiens (female, 70 years) substantia nigra tissue associated with Parkinson's disease
Tissue
Homo sapiens (male, 84 years) posterior cingulate gyrus tissue associated with Parkinson's disease
Tissue
Homo sapiens (male, 86 years) substantia nigra tissue
Tissue
Homo sapiens (female, 83 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment
Tissue
Homo sapiens (male, 81 years) middle temporal gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy

Attribution

Award
HG012076
Principal Investigator(s)
Contact P.I.
Ansuman Satpathy
Lab
Ryan Corces, Gladstone Institute UCSF