bone marrow — IGVFSM6460HYJE

preview
1{
2    "@context": "/terms/",
3    "@id": "/multiplexed-samples/IGVFSM6460HYJE/",
4    "@type": [
5        "MultiplexedSample",
6        "Sample",
7        "Item"
8    ],
9    "accession": "IGVFSM6460HYJE",
10    "aliases": [
11        "maya-kasowski:multiplexed_samples_10X_multiome"
12    ],
13    "audit": {},
14    "award": {
15        "@id": "/awards/HG012076/",
16        "component": "mapping"
17    },
18    "biomarkers": [],
19    "classifications": [
20        "primary cell",
21        "multiplexed sample"
22    ],
23    "creation_timestamp": "2025-03-06T02:30:24.451382+00:00",
24    "disease_terms": [],
25    "donors": [
26        {
27            "@id": "/human-donors/IGVFDO0898EWTR/",
28            "accession": "IGVFDO0898EWTR",
29            "status": "released"
30        },
31        {
32            "@id": "/human-donors/IGVFDO0903GCXW/",
33            "accession": "IGVFDO0903GCXW",
34            "status": "released"
35        },
36        {
37            "@id": "/human-donors/IGVFDO1129QRIW/",
38            "accession": "IGVFDO1129QRIW",
39            "status": "released"
40        },
41        {
42            "@id": "/human-donors/IGVFDO1836DUYP/",
43            "accession": "IGVFDO1836DUYP",
44            "status": "released"
45        },
46        {
47            "@id": "/human-donors/IGVFDO2417NVHU/",
48            "accession": "IGVFDO2417NVHU",
49            "status": "released"
50        },
51        {
52            "@id": "/human-donors/IGVFDO2788XNBM/",
53            "accession": "IGVFDO2788XNBM",
54            "status": "released"
55        },
56        {
57            "@id": "/human-donors/IGVFDO3006RCEY/",
58            "accession": "IGVFDO3006RCEY",
59            "status": "released"
60        },
61        {
62            "@id": "/human-donors/IGVFDO3127CQWI/",
63            "accession": "IGVFDO3127CQWI",
64            "status": "released"
65        },
66        {
67            "@id": "/human-donors/IGVFDO3656DWZS/",
68            "accession": "IGVFDO3656DWZS",
69            "status": "released"
70        },
71        {
72            "@id": "/human-donors/IGVFDO4084QBKB/",
73            "accession": "IGVFDO4084QBKB",
74            "status": "released"
75        },
76        {
77            "@id": "/human-donors/IGVFDO4822HOJJ/",
78            "accession": "IGVFDO4822HOJJ",
79            "status": "released"
80        },
81        {
82            "@id": "/human-donors/IGVFDO5779BART/",
83            "accession": "IGVFDO5779BART",
84            "status": "released"
85        },
86        {
87            "@id": "/human-donors/IGVFDO6383SRAQ/",
88            "accession": "IGVFDO6383SRAQ",
89            "status": "released"
90        },
91        {
92            "@id": "/human-donors/IGVFDO6768UXWX/",
93            "accession": "IGVFDO6768UXWX",
94            "status": "released"
95        },
96        {
97            "@id": "/human-donors/IGVFDO7396NRBT/",
98            "accession": "IGVFDO7396NRBT",
99            "status": "released"
100        },
101        {
102            "@id": "/human-donors/IGVFDO8056NEJH/",
103            "accession": "IGVFDO8056NEJH",
104            "status": "released"
105        },
106        {
107            "@id": "/human-donors/IGVFDO9046WFVW/",
108            "accession": "IGVFDO9046WFVW",
109            "status": "released"
110        },
111        {
112            "@id": "/human-donors/IGVFDO9084ROFI/",
113            "accession": "IGVFDO9084ROFI",
114            "status": "released"
115        },
116        {
117            "@id": "/human-donors/IGVFDO9247BXQA/",
118            "accession": "IGVFDO9247BXQA",
119            "status": "released"
120        },
121        {
122            "@id": "/human-donors/IGVFDO9663VUZC/",
123            "accession": "IGVFDO9663VUZC",
124            "status": "released"
125        },
126        {
127            "@id": "/human-donors/IGVFDO9713CSCX/",
128            "accession": "IGVFDO9713CSCX",
129            "status": "released"
130        },
131        {
132            "@id": "/human-donors/IGVFDO9834PLUM/",
133            "accession": "IGVFDO9834PLUM",
134            "status": "released"
135        }
136    ],
137    "file_sets": [
138        {
139            "@id": "/measurement-sets/IGVFDS7221AXOO/",
140            "accession": "IGVFDS7221AXOO",
141            "aliases": [
142                "maya-kasowski:10X_multiome_snRNA"
143            ],
144            "file_set_type": "experimental data",
145            "lab": {
146                "title": "Maya Kasowski, Stanford"
147            },
148            "preferred_assay_title": "10x multiome",
149            "status": "preview",
150            "summary": "single-nucleus RNA sequencing assay (10x multiome)"
151        },
152        {
153            "@id": "/measurement-sets/IGVFDS6299DIZF/",
154            "accession": "IGVFDS6299DIZF",
155            "aliases": [
156                "maya-kasowski:10X_multiome_snATAC"
157            ],
158            "file_set_type": "experimental data",
159            "lab": {
160                "title": "Maya Kasowski, Stanford"
161            },
162            "preferred_assay_title": "10x multiome",
163            "status": "preview",
164            "summary": "single-nucleus ATAC-seq (10x multiome)"
165        }
166    ],
167    "institutional_certificates": [
168        {
169            "@id": "/institutional-certificates/5d9a7abd-9957-4b1a-91cd-72ce9610785c/",
170            "certificate_identifier": "IP115-20",
171            "controlled_access": true,
172            "data_use_limitation": "GRU",
173            "status": "released"
174        }
175    ],
176    "lab": {
177        "@id": "/labs/maya-kasowski/",
178        "title": "Maya Kasowski, Stanford"
179    },
180    "modifications": [],
181    "multiplexed_in": [],
182    "multiplexed_samples": [
183        {
184            "@id": "/primary-cells/IGVFSM3029MIRU/",
185            "@type": [
186                "PrimaryCell",
187                "Biosample",
188                "Sample",
189                "Item"
190            ],
191            "accession": "IGVFSM3029MIRU",
192            "donors": [
193                {
194                    "@id": "/human-donors/IGVFDO8056NEJH/",
195                    "accession": "IGVFDO8056NEJH",
196                    "status": "released"
197                }
198            ],
199            "sample_terms": [
200                {
201                    "@id": "/sample-terms/UBERON_0002371/",
202                    "status": "released",
203                    "term_name": "bone marrow"
204                }
205            ],
206            "status": "released",
207            "summary": "Homo sapiens bone marrow cell"
208        },
209        {
210            "@id": "/primary-cells/IGVFSM3929UTIP/",
211            "@type": [
212                "PrimaryCell",
213                "Biosample",
214                "Sample",
215                "Item"
216            ],
217            "accession": "IGVFSM3929UTIP",
218            "donors": [
219                {
220                    "@id": "/human-donors/IGVFDO7396NRBT/",
221                    "accession": "IGVFDO7396NRBT",
222                    "status": "released"
223                }
224            ],
225            "sample_terms": [
226                {
227                    "@id": "/sample-terms/UBERON_0002371/",
228                    "status": "released",
229                    "term_name": "bone marrow"
230                }
231            ],
232            "status": "released",
233            "summary": "Homo sapiens bone marrow cell"
234        },
235        {
236            "@id": "/primary-cells/IGVFSM7706IRBK/",
237            "@type": [
238                "PrimaryCell",
239                "Biosample",
240                "Sample",
241                "Item"
242            ],
243            "accession": "IGVFSM7706IRBK",
244            "donors": [
245                {
246                    "@id": "/human-donors/IGVFDO9663VUZC/",
247                    "accession": "IGVFDO9663VUZC",
248                    "status": "released"
249                }
250            ],
251            "sample_terms": [
252                {
253                    "@id": "/sample-terms/UBERON_0002371/",
254                    "status": "released",
255                    "term_name": "bone marrow"
256                }
257            ],
258            "status": "released",
259            "summary": "Homo sapiens bone marrow cell"
260        },
261        {
262            "@id": "/primary-cells/IGVFSM5709TGBU/",
263            "@type": [
264                "PrimaryCell",
265                "Biosample",
266                "Sample",
267                "Item"
268            ],
269            "accession": "IGVFSM5709TGBU",
270            "donors": [
271                {
272                    "@id": "/human-donors/IGVFDO3006RCEY/",
273                    "accession": "IGVFDO3006RCEY",
274                    "status": "released"
275                }
276            ],
277            "sample_terms": [
278                {
279                    "@id": "/sample-terms/UBERON_0002371/",
280                    "status": "released",
281                    "term_name": "bone marrow"
282                }
283            ],
284            "status": "released",
285            "summary": "Homo sapiens bone marrow cell"
286        },
287        {
288            "@id": "/primary-cells/IGVFSM0581CJSS/",
289            "@type": [
290                "PrimaryCell",
291                "Biosample",
292                "Sample",
293                "Item"
294            ],
295            "accession": "IGVFSM0581CJSS",
296            "donors": [
297                {
298                    "@id": "/human-donors/IGVFDO2788XNBM/",
299                    "accession": "IGVFDO2788XNBM",
300                    "status": "released"
301                }
302            ],
303            "sample_terms": [
304                {
305                    "@id": "/sample-terms/UBERON_0002371/",
306                    "status": "released",
307                    "term_name": "bone marrow"
308                }
309            ],
310            "status": "released",
311            "summary": "Homo sapiens bone marrow cell"
312        },
313        {
314            "@id": "/primary-cells/IGVFSM4928XYWH/",
315            "@type": [
316                "PrimaryCell",
317                "Biosample",
318                "Sample",
319                "Item"
320            ],
321            "accession": "IGVFSM4928XYWH",
322            "donors": [
323                {
324                    "@id": "/human-donors/IGVFDO6768UXWX/",
325                    "accession": "IGVFDO6768UXWX",
326                    "status": "released"
327                }
328            ],
329            "sample_terms": [
330                {
331                    "@id": "/sample-terms/UBERON_0002371/",
332                    "status": "released",
333                    "term_name": "bone marrow"
334                }
335            ],
336            "status": "released",
337            "summary": "Homo sapiens bone marrow cell"
338        },
339        {
340            "@id": "/primary-cells/IGVFSM8301YEYP/",
341            "@type": [
342                "PrimaryCell",
343                "Biosample",
344                "Sample",
345                "Item"
346            ],
347            "accession": "IGVFSM8301YEYP",
348            "donors": [
349                {
350                    "@id": "/human-donors/IGVFDO1129QRIW/",
351                    "accession": "IGVFDO1129QRIW",
352                    "status": "released"
353                }
354            ],
355            "sample_terms": [
356                {
357                    "@id": "/sample-terms/UBERON_0002371/",
358                    "status": "released",
359                    "term_name": "bone marrow"
360                }
361            ],
362            "status": "released",
363            "summary": "Homo sapiens (male) bone marrow cell"
364        },
365        {
366            "@id": "/primary-cells/IGVFSM9602VGKH/",
367            "@type": [
368                "PrimaryCell",
369                "Biosample",
370                "Sample",
371                "Item"
372            ],
373            "accession": "IGVFSM9602VGKH",
374            "donors": [
375                {
376                    "@id": "/human-donors/IGVFDO3656DWZS/",
377                    "accession": "IGVFDO3656DWZS",
378                    "status": "released"
379                }
380            ],
381            "sample_terms": [
382                {
383                    "@id": "/sample-terms/UBERON_0002371/",
384                    "status": "released",
385                    "term_name": "bone marrow"
386                }
387            ],
388            "status": "released",
389            "summary": "Homo sapiens (female) bone marrow cell"
390        },
391        {
392            "@id": "/primary-cells/IGVFSM5874RLLU/",
393            "@type": [
394                "PrimaryCell",
395                "Biosample",
396                "Sample",
397                "Item"
398            ],
399            "accession": "IGVFSM5874RLLU",
400            "donors": [
401                {
402                    "@id": "/human-donors/IGVFDO9084ROFI/",
403                    "accession": "IGVFDO9084ROFI",
404                    "status": "released"
405                }
406            ],
407            "sample_terms": [
408                {
409                    "@id": "/sample-terms/UBERON_0002371/",
410                    "status": "released",
411                    "term_name": "bone marrow"
412                }
413            ],
414            "status": "released",
415            "summary": "Homo sapiens (female) bone marrow cell"
416        },
417        {
418            "@id": "/primary-cells/IGVFSM4646RYKA/",
419            "@type": [
420                "PrimaryCell",
421                "Biosample",
422                "Sample",
423                "Item"
424            ],
425            "accession": "IGVFSM4646RYKA",
426            "donors": [
427                {
428                    "@id": "/human-donors/IGVFDO1836DUYP/",
429                    "accession": "IGVFDO1836DUYP",
430                    "status": "released"
431                }
432            ],
433            "sample_terms": [
434                {
435                    "@id": "/sample-terms/UBERON_0002371/",
436                    "status": "released",
437                    "term_name": "bone marrow"
438                }
439            ],
440            "status": "released",
441            "summary": "Homo sapiens bone marrow cell"
442        },
443        {
444            "@id": "/primary-cells/IGVFSM5209OUZF/",
445            "@type": [
446                "PrimaryCell",
447                "Biosample",
448                "Sample",
449                "Item"
450            ],
451            "accession": "IGVFSM5209OUZF",
452            "donors": [
453                {
454                    "@id": "/human-donors/IGVFDO0898EWTR/",
455                    "accession": "IGVFDO0898EWTR",
456                    "status": "released"
457                }
458            ],
459            "sample_terms": [
460                {
461                    "@id": "/sample-terms/UBERON_0002371/",
462                    "status": "released",
463                    "term_name": "bone marrow"
464                }
465            ],
466            "status": "released",
467            "summary": "Homo sapiens (male) bone marrow cell"
468        },
469        {
470            "@id": "/primary-cells/IGVFSM2473ULRQ/",
471            "@type": [
472                "PrimaryCell",
473                "Biosample",
474                "Sample",
475                "Item"
476            ],
477            "accession": "IGVFSM2473ULRQ",
478            "donors": [
479                {
480                    "@id": "/human-donors/IGVFDO2417NVHU/",
481                    "accession": "IGVFDO2417NVHU",
482                    "status": "released"
483                }
484            ],
485            "sample_terms": [
486                {
487                    "@id": "/sample-terms/UBERON_0002371/",
488                    "status": "released",
489                    "term_name": "bone marrow"
490                }
491            ],
492            "status": "released",
493            "summary": "Homo sapiens (female) bone marrow cell"
494        },
495        {
496            "@id": "/primary-cells/IGVFSM4917TSGH/",
497            "@type": [
498                "PrimaryCell",
499                "Biosample",
500                "Sample",
501                "Item"
502            ],
503            "accession": "IGVFSM4917TSGH",
504            "donors": [
505                {
506                    "@id": "/human-donors/IGVFDO4084QBKB/",
507                    "accession": "IGVFDO4084QBKB",
508                    "status": "released"
509                }
510            ],
511            "sample_terms": [
512                {
513                    "@id": "/sample-terms/UBERON_0002371/",
514                    "status": "released",
515                    "term_name": "bone marrow"
516                }
517            ],
518            "status": "released",
519            "summary": "Homo sapiens (male) bone marrow cell"
520        },
521        {
522            "@id": "/primary-cells/IGVFSM7467BMWJ/",
523            "@type": [
524                "PrimaryCell",
525                "Biosample",
526                "Sample",
527                "Item"
528            ],
529            "accession": "IGVFSM7467BMWJ",
530            "donors": [
531                {
532                    "@id": "/human-donors/IGVFDO6383SRAQ/",
533                    "accession": "IGVFDO6383SRAQ",
534                    "status": "released"
535                }
536            ],
537            "sample_terms": [
538                {
539                    "@id": "/sample-terms/UBERON_0002371/",
540                    "status": "released",
541                    "term_name": "bone marrow"
542                }
543            ],
544            "status": "released",
545            "summary": "Homo sapiens (male) bone marrow cell"
546        },
547        {
548            "@id": "/primary-cells/IGVFSM4994MYXP/",
549            "@type": [
550                "PrimaryCell",
551                "Biosample",
552                "Sample",
553                "Item"
554            ],
555            "accession": "IGVFSM4994MYXP",
556            "donors": [
557                {
558                    "@id": "/human-donors/IGVFDO9713CSCX/",
559                    "accession": "IGVFDO9713CSCX",
560                    "status": "released"
561                }
562            ],
563            "sample_terms": [
564                {
565                    "@id": "/sample-terms/UBERON_0002371/",
566                    "status": "released",
567                    "term_name": "bone marrow"
568                }
569            ],
570            "status": "released",
571            "summary": "Homo sapiens (female) bone marrow cell"
572        },
573        {
574            "@id": "/primary-cells/IGVFSM6360JZDZ/",
575            "@type": [
576                "PrimaryCell",
577                "Biosample",
578                "Sample",
579                "Item"
580            ],
581            "accession": "IGVFSM6360JZDZ",
582            "donors": [
583                {
584                    "@id": "/human-donors/IGVFDO5779BART/",
585                    "accession": "IGVFDO5779BART",
586                    "status": "released"
587                }
588            ],
589            "sample_terms": [
590                {
591                    "@id": "/sample-terms/UBERON_0002371/",
592                    "status": "released",
593                    "term_name": "bone marrow"
594                }
595            ],
596            "status": "released",
597            "summary": "Homo sapiens (male) bone marrow cell"
598        },
599        {
600            "@id": "/primary-cells/IGVFSM0863UBKQ/",
601            "@type": [
602                "PrimaryCell",
603                "Biosample",
604                "Sample",
605                "Item"
606            ],
607            "accession": "IGVFSM0863UBKQ",
608            "donors": [
609                {
610                    "@id": "/human-donors/IGVFDO9247BXQA/",
611                    "accession": "IGVFDO9247BXQA",
612                    "status": "released"
613                }
614            ],
615            "sample_terms": [
616                {
617                    "@id": "/sample-terms/UBERON_0002371/",
618                    "status": "released",
619                    "term_name": "bone marrow"
620                }
621            ],
622            "status": "released",
623            "summary": "Homo sapiens (female) bone marrow cell"
624        },
625        {
626            "@id": "/primary-cells/IGVFSM8506OXWG/",
627            "@type": [
628                "PrimaryCell",
629                "Biosample",
630                "Sample",
631                "Item"
632            ],
633            "accession": "IGVFSM8506OXWG",
634            "donors": [
635                {
636                    "@id": "/human-donors/IGVFDO9046WFVW/",
637                    "accession": "IGVFDO9046WFVW",
638                    "status": "released"
639                }
640            ],
641            "sample_terms": [
642                {
643                    "@id": "/sample-terms/UBERON_0002371/",
644                    "status": "released",
645                    "term_name": "bone marrow"
646                }
647            ],
648            "status": "released",
649            "summary": "Homo sapiens (male) bone marrow cell"
650        },
651        {
652            "@id": "/primary-cells/IGVFSM2560VILO/",
653            "@type": [
654                "PrimaryCell",
655                "Biosample",
656                "Sample",
657                "Item"
658            ],
659            "accession": "IGVFSM2560VILO",
660            "donors": [
661                {
662                    "@id": "/human-donors/IGVFDO3127CQWI/",
663                    "accession": "IGVFDO3127CQWI",
664                    "status": "released"
665                }
666            ],
667            "sample_terms": [
668                {
669                    "@id": "/sample-terms/UBERON_0002371/",
670                    "status": "released",
671                    "term_name": "bone marrow"
672                }
673            ],
674            "status": "released",
675            "summary": "Homo sapiens (female) bone marrow cell"
676        },
677        {
678            "@id": "/primary-cells/IGVFSM2041HMYC/",
679            "@type": [
680                "PrimaryCell",
681                "Biosample",
682                "Sample",
683                "Item"
684            ],
685            "accession": "IGVFSM2041HMYC",
686            "donors": [
687                {
688                    "@id": "/human-donors/IGVFDO9834PLUM/",
689                    "accession": "IGVFDO9834PLUM",
690                    "status": "released"
691                }
692            ],
693            "sample_terms": [
694                {
695                    "@id": "/sample-terms/UBERON_0002371/",
696                    "status": "released",
697                    "term_name": "bone marrow"
698                }
699            ],
700            "status": "released",
701            "summary": "Homo sapiens (female) bone marrow cell"
702        },
703        {
704            "@id": "/primary-cells/IGVFSM5600IQHV/",
705            "@type": [
706                "PrimaryCell",
707                "Biosample",
708                "Sample",
709                "Item"
710            ],
711            "accession": "IGVFSM5600IQHV",
712            "donors": [
713                {
714                    "@id": "/human-donors/IGVFDO4822HOJJ/",
715                    "accession": "IGVFDO4822HOJJ",
716                    "status": "released"
717                }
718            ],
719            "sample_terms": [
720                {
721                    "@id": "/sample-terms/UBERON_0002371/",
722                    "status": "released",
723                    "term_name": "bone marrow"
724                }
725            ],
726            "status": "released",
727            "summary": "Homo sapiens (female) bone marrow cell"
728        },
729        {
730            "@id": "/primary-cells/IGVFSM4986COEO/",
731            "@type": [
732                "PrimaryCell",
733                "Biosample",
734                "Sample",
735                "Item"
736            ],
737            "accession": "IGVFSM4986COEO",
738            "donors": [
739                {
740                    "@id": "/human-donors/IGVFDO0903GCXW/",
741                    "accession": "IGVFDO0903GCXW",
742                    "status": "released"
743                }
744            ],
745            "sample_terms": [
746                {
747                    "@id": "/sample-terms/UBERON_0002371/",
748                    "status": "released",
749                    "term_name": "bone marrow"
750                }
751            ],
752            "status": "released",
753            "summary": "Homo sapiens (female) bone marrow cell"
754        }
755    ],
756    "multiplexing_methods": [
757        "genetic"
758    ],
759    "origin_of": [],
760    "sample_terms": [
761        {
762            "@id": "/sample-terms/UBERON_0002371/",
763            "status": "released",
764            "term_name": "bone marrow"
765        }
766    ],
767    "schema_version": "10",
768    "sorted_fractions": [],
769    "sources": [
770        {
771            "@id": "/labs/maya-kasowski/",
772            "status": "current",
773            "title": "Maya Kasowski, Stanford"
774        }
775    ],
776    "status": "preview",
777    "submitted_by": {
778        "@id": "/users/2bebcf9d-414f-4058-8d97-00020741a419/",
779        "title": "Shouvik Mani"
780    },
781    "summary": "multiplexed sample: Homo sapiens bone marrow cell; Homo sapiens (female) bone marrow cell; ... and 20 more samples",
782    "taxa": "Homo sapiens",
783    "treatments": [],
784    "uuid": "91508dc5-a62b-4085-b357-ed01b9dc904c",
785    "virtual": false
786}