Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
MultiplexedSample
/
putamen — IGVFSM5494QQKW
putamen — IGVFSM5494QQKW
preview
Json view
This object is in preview status. Metadata is subject to change until this object is released.
Summary
multiplexed sample: Homo sapiens (male, 73 years) putamen tissue; Homo sapiens (male, 82 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 10 more samples
Multiplexing Method
genetic
Sources
Banner Health
Taxa
Homo sapiens
Aliases
igvf:corces_multiplexedSample_RP002_G5
Attribution
Ryan Corces, Gladstone Institute UCSF
(
HG012076
—
Ansuman Satpathy
)
Donors
12 items
1
2
Accession
Aliases
Sex
Taxa
IGVFDO0112XZXT
igvf:corces_donor_BANN0218
male
Homo sapiens
IGVFDO0802OVOD
igvf:corces_donor_BANN1030
male
Homo sapiens
IGVFDO1997RFPJ
igvf:corces_donor_BANN1340
male
Homo sapiens
IGVFDO4108VCBA
igvf:corces_donor_BANN0325
male
Homo sapiens
IGVFDO4191KJBR
igvf:corces_donor_BANN0129
male
Homo sapiens
IGVFDO4438WASY
igvf:corces_donor_BANN1644
male
Homo sapiens
IGVFDO5205IAEO
igvf:corces_donor_BANN1632
male
Homo sapiens
IGVFDO7227BIXW
igvf:corces_donor_BANN1614
male
Homo sapiens
IGVFDO7649CIGW
igvf:corces_donor_BANN9902
female
Homo sapiens
IGVFDO8451NMBP
igvf:corces_donor_BANN1756
male
Homo sapiens
File Sets
2 items
Accession
Summary
Aliases
Lab
IGVFDS1921IDBT
single-nucleus RNA sequencing assay (10x multiome)
igvf:corces_measurementSet_RP002_G5_RNA
Ryan Corces, Gladstone Institute UCSF
IGVFDS9516JWYR
single-nucleus ATAC-seq (10x multiome)
igvf:corces_measurementSet_RP002_G5_ATAC
Ryan Corces, Gladstone Institute UCSF
Multiplexed Samples
12 items
1
2
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM0715QJMD
Tissue
putamen
Homo sapiens (male, 73 years) putamen tissue
IGVFSM2240WLYY
Tissue
middle temporal gyrus
Parkinson's disease
Homo sapiens (male, 82 years) middle temporal gyrus tissue associated with Parkinson's disease
IGVFSM4061MNBW
Tissue
putamen
cerebral amyloid angiopathy
,
Parkinson's disease
Homo sapiens (male, 78 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy
IGVFSM4226NVQG
Tissue
substantia nigra
cerebral amyloid angiopathy
,
mild cognitive impairment
,
Parkinson's disease
Homo sapiens (male, 92 years) substantia nigra tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment
IGVFSM5405WTGW
Tissue
middle temporal gyrus
Parkinson's disease
Homo sapiens (male, 78 years) middle temporal gyrus tissue associated with Parkinson's disease
IGVFSM5918FPMU
Tissue
putamen
Parkinson's disease
Homo sapiens (male, 63 years) putamen tissue associated with Parkinson's disease
IGVFSM6274HZKR
Tissue
cerebellar cortex
cerebral amyloid angiopathy
,
mild cognitive impairment
,
Parkinson's disease
Homo sapiens (male, 80 years) cerebellar cortex tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment
IGVFSM6519LHYJ
Tissue
middle temporal gyrus
Homo sapiens (male, 79 years) middle temporal gyrus tissue
IGVFSM6656RHGU
Tissue
putamen
cerebral amyloid angiopathy
Homo sapiens (female, 70 years) putamen tissue associated with cerebral amyloid angiopathy
IGVFSM6732THUF
Tissue
posterior cingulate gyrus
Alzheimer disease
,
cerebral amyloid angiopathy
,
Parkinson's disease
Homo sapiens (male, 80 years) posterior cingulate gyrus tissue associated with Alzheimer disease, Parkinson's disease, cerebral amyloid angiopathy