bone marrow — IGVFSM4252CQLW

preview
1{
2    "@context": "/terms/",
3    "@id": "/multiplexed-samples/IGVFSM4252CQLW/",
4    "@type": [
5        "MultiplexedSample",
6        "Sample",
7        "Item"
8    ],
9    "accession": "IGVFSM4252CQLW",
10    "aliases": [
11        "maya-kasowski:multiplexed_samples_Parse_P2"
12    ],
13    "audit": {
14        "INTERNAL_ACTION": [
15            {
16                "category": "mismatched status",
17                "detail": "Preview multiplexed sample [IGVFSM4252CQLW](/multiplexed-samples/IGVFSM4252CQLW/) has in progress subobject tabular file [IGVFFI0307NJHR](/tabular-files/IGVFFI0307NJHR/).",
18                "level": 30,
19                "level_name": "INTERNAL_ACTION",
20                "name": "audit_item_status",
21                "path": "/multiplexed-samples/IGVFSM4252CQLW/"
22            }
23        ]
24    },
25    "award": {
26        "@id": "/awards/HG012076/",
27        "component": "mapping"
28    },
29    "barcode_map": "/tabular-files/IGVFFI0307NJHR/",
30    "biomarkers": [],
31    "classifications": [
32        "primary cell",
33        "multiplexed sample"
34    ],
35    "creation_timestamp": "2025-03-09T08:51:16.148620+00:00",
36    "disease_terms": [],
37    "donors": [
38        {
39            "@id": "/human-donors/IGVFDO0516IWTA/",
40            "accession": "IGVFDO0516IWTA",
41            "status": "preview"
42        },
43        {
44            "@id": "/human-donors/IGVFDO1210OZHC/",
45            "accession": "IGVFDO1210OZHC",
46            "status": "preview"
47        },
48        {
49            "@id": "/human-donors/IGVFDO1836DUYP/",
50            "accession": "IGVFDO1836DUYP",
51            "status": "released"
52        },
53        {
54            "@id": "/human-donors/IGVFDO2788XNBM/",
55            "accession": "IGVFDO2788XNBM",
56            "status": "released"
57        },
58        {
59            "@id": "/human-donors/IGVFDO3006RCEY/",
60            "accession": "IGVFDO3006RCEY",
61            "status": "released"
62        },
63        {
64            "@id": "/human-donors/IGVFDO3010QRAU/",
65            "accession": "IGVFDO3010QRAU",
66            "status": "released"
67        },
68        {
69            "@id": "/human-donors/IGVFDO3765EKDF/",
70            "accession": "IGVFDO3765EKDF",
71            "status": "preview"
72        },
73        {
74            "@id": "/human-donors/IGVFDO4373FEUT/",
75            "accession": "IGVFDO4373FEUT",
76            "status": "preview"
77        },
78        {
79            "@id": "/human-donors/IGVFDO4458ECNK/",
80            "accession": "IGVFDO4458ECNK",
81            "status": "preview"
82        },
83        {
84            "@id": "/human-donors/IGVFDO4733WBSW/",
85            "accession": "IGVFDO4733WBSW",
86            "status": "preview"
87        },
88        {
89            "@id": "/human-donors/IGVFDO6768UXWX/",
90            "accession": "IGVFDO6768UXWX",
91            "status": "released"
92        },
93        {
94            "@id": "/human-donors/IGVFDO7396NRBT/",
95            "accession": "IGVFDO7396NRBT",
96            "status": "released"
97        },
98        {
99            "@id": "/human-donors/IGVFDO8056NEJH/",
100            "accession": "IGVFDO8056NEJH",
101            "status": "released"
102        },
103        {
104            "@id": "/human-donors/IGVFDO9663VUZC/",
105            "accession": "IGVFDO9663VUZC",
106            "status": "released"
107        }
108    ],
109    "file_sets": [
110        {
111            "@id": "/measurement-sets/IGVFDS0559WMGB/",
112            "accession": "IGVFDS0559WMGB",
113            "aliases": [
114                "maya-kasowski:Parse_P2_scRNA"
115            ],
116            "file_set_type": "experimental data",
117            "lab": {
118                "title": "Maya Kasowski, Stanford"
119            },
120            "preferred_assay_title": "Parse SPLiT-seq",
121            "status": "preview",
122            "summary": "Parse SPLiT-seq"
123        }
124    ],
125    "institutional_certificates": [
126        {
127            "@id": "/institutional-certificates/5d9a7abd-9957-4b1a-91cd-72ce9610785c/",
128            "certificate_identifier": "IP115-20",
129            "controlled_access": true,
130            "data_use_limitation": "GRU",
131            "status": "released"
132        }
133    ],
134    "lab": {
135        "@id": "/labs/maya-kasowski/",
136        "title": "Maya Kasowski, Stanford"
137    },
138    "modifications": [],
139    "multiplexed_in": [],
140    "multiplexed_samples": [
141        {
142            "@id": "/primary-cells/IGVFSM3029MIRU/",
143            "@type": [
144                "PrimaryCell",
145                "Biosample",
146                "Sample",
147                "Item"
148            ],
149            "accession": "IGVFSM3029MIRU",
150            "donors": [
151                {
152                    "@id": "/human-donors/IGVFDO8056NEJH/",
153                    "accession": "IGVFDO8056NEJH",
154                    "status": "released"
155                }
156            ],
157            "sample_terms": [
158                {
159                    "@id": "/sample-terms/UBERON_0002371/",
160                    "status": "released",
161                    "term_name": "bone marrow"
162                }
163            ],
164            "status": "released",
165            "summary": "Homo sapiens bone marrow cell"
166        },
167        {
168            "@id": "/primary-cells/IGVFSM3929UTIP/",
169            "@type": [
170                "PrimaryCell",
171                "Biosample",
172                "Sample",
173                "Item"
174            ],
175            "accession": "IGVFSM3929UTIP",
176            "donors": [
177                {
178                    "@id": "/human-donors/IGVFDO7396NRBT/",
179                    "accession": "IGVFDO7396NRBT",
180                    "status": "released"
181                }
182            ],
183            "sample_terms": [
184                {
185                    "@id": "/sample-terms/UBERON_0002371/",
186                    "status": "released",
187                    "term_name": "bone marrow"
188                }
189            ],
190            "status": "released",
191            "summary": "Homo sapiens bone marrow cell"
192        },
193        {
194            "@id": "/primary-cells/IGVFSM7706IRBK/",
195            "@type": [
196                "PrimaryCell",
197                "Biosample",
198                "Sample",
199                "Item"
200            ],
201            "accession": "IGVFSM7706IRBK",
202            "donors": [
203                {
204                    "@id": "/human-donors/IGVFDO9663VUZC/",
205                    "accession": "IGVFDO9663VUZC",
206                    "status": "released"
207                }
208            ],
209            "sample_terms": [
210                {
211                    "@id": "/sample-terms/UBERON_0002371/",
212                    "status": "released",
213                    "term_name": "bone marrow"
214                }
215            ],
216            "status": "released",
217            "summary": "Homo sapiens bone marrow cell"
218        },
219        {
220            "@id": "/primary-cells/IGVFSM5709TGBU/",
221            "@type": [
222                "PrimaryCell",
223                "Biosample",
224                "Sample",
225                "Item"
226            ],
227            "accession": "IGVFSM5709TGBU",
228            "donors": [
229                {
230                    "@id": "/human-donors/IGVFDO3006RCEY/",
231                    "accession": "IGVFDO3006RCEY",
232                    "status": "released"
233                }
234            ],
235            "sample_terms": [
236                {
237                    "@id": "/sample-terms/UBERON_0002371/",
238                    "status": "released",
239                    "term_name": "bone marrow"
240                }
241            ],
242            "status": "released",
243            "summary": "Homo sapiens bone marrow cell"
244        },
245        {
246            "@id": "/primary-cells/IGVFSM0581CJSS/",
247            "@type": [
248                "PrimaryCell",
249                "Biosample",
250                "Sample",
251                "Item"
252            ],
253            "accession": "IGVFSM0581CJSS",
254            "donors": [
255                {
256                    "@id": "/human-donors/IGVFDO2788XNBM/",
257                    "accession": "IGVFDO2788XNBM",
258                    "status": "released"
259                }
260            ],
261            "sample_terms": [
262                {
263                    "@id": "/sample-terms/UBERON_0002371/",
264                    "status": "released",
265                    "term_name": "bone marrow"
266                }
267            ],
268            "status": "released",
269            "summary": "Homo sapiens bone marrow cell"
270        },
271        {
272            "@id": "/primary-cells/IGVFSM4928XYWH/",
273            "@type": [
274                "PrimaryCell",
275                "Biosample",
276                "Sample",
277                "Item"
278            ],
279            "accession": "IGVFSM4928XYWH",
280            "donors": [
281                {
282                    "@id": "/human-donors/IGVFDO6768UXWX/",
283                    "accession": "IGVFDO6768UXWX",
284                    "status": "released"
285                }
286            ],
287            "sample_terms": [
288                {
289                    "@id": "/sample-terms/UBERON_0002371/",
290                    "status": "released",
291                    "term_name": "bone marrow"
292                }
293            ],
294            "status": "released",
295            "summary": "Homo sapiens bone marrow cell"
296        },
297        {
298            "@id": "/primary-cells/IGVFSM9062EOZK/",
299            "@type": [
300                "PrimaryCell",
301                "Biosample",
302                "Sample",
303                "Item"
304            ],
305            "accession": "IGVFSM9062EOZK",
306            "donors": [
307                {
308                    "@id": "/human-donors/IGVFDO4373FEUT/",
309                    "accession": "IGVFDO4373FEUT",
310                    "status": "preview"
311                }
312            ],
313            "sample_terms": [
314                {
315                    "@id": "/sample-terms/UBERON_0002371/",
316                    "status": "released",
317                    "term_name": "bone marrow"
318                }
319            ],
320            "status": "preview",
321            "summary": "Homo sapiens bone marrow cell"
322        },
323        {
324            "@id": "/primary-cells/IGVFSM4646RYKA/",
325            "@type": [
326                "PrimaryCell",
327                "Biosample",
328                "Sample",
329                "Item"
330            ],
331            "accession": "IGVFSM4646RYKA",
332            "donors": [
333                {
334                    "@id": "/human-donors/IGVFDO1836DUYP/",
335                    "accession": "IGVFDO1836DUYP",
336                    "status": "released"
337                }
338            ],
339            "sample_terms": [
340                {
341                    "@id": "/sample-terms/UBERON_0002371/",
342                    "status": "released",
343                    "term_name": "bone marrow"
344                }
345            ],
346            "status": "released",
347            "summary": "Homo sapiens bone marrow cell"
348        },
349        {
350            "@id": "/primary-cells/IGVFSM6526PSMT/",
351            "@type": [
352                "PrimaryCell",
353                "Biosample",
354                "Sample",
355                "Item"
356            ],
357            "accession": "IGVFSM6526PSMT",
358            "donors": [
359                {
360                    "@id": "/human-donors/IGVFDO3010QRAU/",
361                    "accession": "IGVFDO3010QRAU",
362                    "status": "released"
363                }
364            ],
365            "sample_terms": [
366                {
367                    "@id": "/sample-terms/UBERON_0002371/",
368                    "status": "released",
369                    "term_name": "bone marrow"
370                }
371            ],
372            "status": "released",
373            "summary": "Homo sapiens (female) bone marrow cell"
374        },
375        {
376            "@id": "/primary-cells/IGVFSM8975RQSK/",
377            "@type": [
378                "PrimaryCell",
379                "Biosample",
380                "Sample",
381                "Item"
382            ],
383            "accession": "IGVFSM8975RQSK",
384            "donors": [
385                {
386                    "@id": "/human-donors/IGVFDO4733WBSW/",
387                    "accession": "IGVFDO4733WBSW",
388                    "status": "preview"
389                }
390            ],
391            "sample_terms": [
392                {
393                    "@id": "/sample-terms/UBERON_0002371/",
394                    "status": "released",
395                    "term_name": "bone marrow"
396                }
397            ],
398            "status": "preview",
399            "summary": "Homo sapiens bone marrow cell"
400        },
401        {
402            "@id": "/primary-cells/IGVFSM3055IEMH/",
403            "@type": [
404                "PrimaryCell",
405                "Biosample",
406                "Sample",
407                "Item"
408            ],
409            "accession": "IGVFSM3055IEMH",
410            "donors": [
411                {
412                    "@id": "/human-donors/IGVFDO4458ECNK/",
413                    "accession": "IGVFDO4458ECNK",
414                    "status": "preview"
415                }
416            ],
417            "sample_terms": [
418                {
419                    "@id": "/sample-terms/UBERON_0012168/",
420                    "status": "released",
421                    "term_name": "umbilical cord blood"
422                }
423            ],
424            "status": "preview",
425            "summary": "Homo sapiens umbilical cord blood cell"
426        },
427        {
428            "@id": "/primary-cells/IGVFSM6334NJCC/",
429            "@type": [
430                "PrimaryCell",
431                "Biosample",
432                "Sample",
433                "Item"
434            ],
435            "accession": "IGVFSM6334NJCC",
436            "donors": [
437                {
438                    "@id": "/human-donors/IGVFDO3765EKDF/",
439                    "accession": "IGVFDO3765EKDF",
440                    "status": "preview"
441                }
442            ],
443            "sample_terms": [
444                {
445                    "@id": "/sample-terms/UBERON_0012168/",
446                    "status": "released",
447                    "term_name": "umbilical cord blood"
448                }
449            ],
450            "status": "preview",
451            "summary": "Homo sapiens umbilical cord blood cell"
452        },
453        {
454            "@id": "/primary-cells/IGVFSM4005XXHE/",
455            "@type": [
456                "PrimaryCell",
457                "Biosample",
458                "Sample",
459                "Item"
460            ],
461            "accession": "IGVFSM4005XXHE",
462            "donors": [
463                {
464                    "@id": "/human-donors/IGVFDO1210OZHC/",
465                    "accession": "IGVFDO1210OZHC",
466                    "status": "preview"
467                }
468            ],
469            "sample_terms": [
470                {
471                    "@id": "/sample-terms/UBERON_0012168/",
472                    "status": "released",
473                    "term_name": "umbilical cord blood"
474                }
475            ],
476            "status": "preview",
477            "summary": "Homo sapiens umbilical cord blood cell"
478        },
479        {
480            "@id": "/primary-cells/IGVFSM2155ZJIY/",
481            "@type": [
482                "PrimaryCell",
483                "Biosample",
484                "Sample",
485                "Item"
486            ],
487            "accession": "IGVFSM2155ZJIY",
488            "donors": [
489                {
490                    "@id": "/human-donors/IGVFDO0516IWTA/",
491                    "accession": "IGVFDO0516IWTA",
492                    "status": "preview"
493                }
494            ],
495            "sample_terms": [
496                {
497                    "@id": "/sample-terms/UBERON_0012168/",
498                    "status": "released",
499                    "term_name": "umbilical cord blood"
500                }
501            ],
502            "status": "preview",
503            "summary": "Homo sapiens umbilical cord blood cell"
504        }
505    ],
506    "multiplexing_methods": [
507        "barcode based"
508    ],
509    "origin_of": [],
510    "sample_terms": [
511        {
512            "@id": "/sample-terms/UBERON_0002371/",
513            "status": "released",
514            "term_name": "bone marrow"
515        },
516        {
517            "@id": "/sample-terms/UBERON_0012168/",
518            "status": "released",
519            "term_name": "umbilical cord blood"
520        }
521    ],
522    "schema_version": "10",
523    "sorted_fractions": [],
524    "sources": [
525        {
526            "@id": "/labs/maya-kasowski/",
527            "status": "current",
528            "title": "Maya Kasowski, Stanford"
529        }
530    ],
531    "status": "preview",
532    "submitted_by": {
533        "@id": "/users/2bebcf9d-414f-4058-8d97-00020741a419/",
534        "title": "Shouvik Mani"
535    },
536    "summary": "multiplexed sample: Homo sapiens bone marrow cell; Homo sapiens umbilical cord blood cell; ... and 12 more samples",
537    "taxa": "Homo sapiens",
538    "treatments": [],
539    "uuid": "cffd94f5-13e4-41b8-806e-a8904a399463",
540    "virtual": false
541}