TeloHAEC — IGVFSM3646QLDO

released

Summary

multiplexed sample: Homo sapiens (female) TeloHAEC cell line treated with 10 ng/mL tumor necrosis factor alpha for 4 hours; Homo sapiens (female) TeloHAEC cell line; ... and 7 more samples

Multiplexing Method

barcode based

Sources

Guillaume Lettre, MHI

Barcode Map

IGVFFI1959EKKL

Taxa

Homo sapiens

Aliases

ansuman-satpathy:multiplexed_sample_igvf2_10x1

Protocols

https://www.protocols.io/view/multi-seq-for-multiome-igvf-round-2-experiment-1-dfqp3mvn

Donors

1 item

Accession

Aliases

Sex

Taxa

IGVFDO3459DFTW

igvf:donor_of_teloHAEC

female

Homo sapiens

File Sets

4 items

IGVFDS1583PWNS

10x multiome with MULTI-seq: cell hashing barcodes, fragments, index, peaks, raw feature barcode matrix

ansuman-satpathy:igvf2_analysis_set

Ansuman Satpathy, Stanford

IGVFDS5111SPGA

single-nucleus RNA sequencing assay (10x multiome with MULTI-seq)

ansuman-satpathy:snRNA-seq_igvf2_10x1

Ansuman Satpathy, Stanford

IGVFDS6369SLCB

single-nucleus ATAC-seq (10x multiome with MULTI-seq)

ansuman-satpathy:snATAC-seq_igvf2_10x1

Ansuman Satpathy, Stanford

IGVFDS9860EXKL

lipid-conjugated oligo sequencing for single-nucleus RNA sequencing assay (10x multiome with MULTI-seq), single-nucleus ATAC-seq (10x multiome with MULTI-seq)