HEK293T — IGVFSM3202SKCS

released
Summary
multiplexed sample: Homo sapiens (female) H9 differentiated cell specimen induced to neuron for 6 days; Homo sapiens (female) H9 differentiated cell specimen induced to neuron for 6 days; ... and 6 more samples
Multiplexing Method
barcode based
Sources
Barcode Map
Taxa
Homo sapiens
Aliases
ansuman-satpathy:multiplexed_sample_igvf5_10x2
Protocols
Attribution

Donors

4 items
Aliases
  • igvf:donor_of_HEK293T
female
Homo sapiens
  • igvf:donor_of_WTC11
male
Homo sapiens
  • igvf:donor_of_H9
female
Homo sapiens
  • igvf:donor_of_H1
male
Homo sapiens

File Sets

4 items
single-nucleus RNA sequencing assay (10x multiome with MULTI-seq)
  • ansuman-satpathy:snRNA-seq_igvf5_10x2
Ansuman Satpathy, Stanford
10x multiome with MULTI-seq: cell hashing barcodes, fragments, index, peaks, raw feature barcode matrix
  • ansuman-satpathy:igvf5_analysis_set_10x2
Ansuman Satpathy, Stanford
lipid-conjugated oligo sequencing for single-nucleus RNA sequencing assay (10x multiome with MULTI-seq), single-nucleus ATAC-seq (10x multiome with MULTI-seq)
  • ansuman-satpathy:multiseq_igvf5_10x2
Ansuman Satpathy, Stanford
single-nucleus ATAC-seq (10x multiome with MULTI-seq)
  • ansuman-satpathy:snATAC-seq_igvf5_10x2
Ansuman Satpathy, Stanford

Multiplexed Samples

8 items
Sample Terms
Summary
InVitroSystem
Homo sapiens (female) H9 differentiated cell specimen induced to neuron for 6 days
InVitroSystem
Homo sapiens (female) H9 differentiated cell specimen induced to neuron for 6 days
InVitroSystem
Homo sapiens (male) H1-hESC induced to gastrula for 2 days
InVitroSystem
Homo sapiens (female) HEK293T cell line
InVitroSystem
Homo sapiens (female) HEK293T cell line
InVitroSystem
Homo sapiens (female) H9 differentiated cell specimen induced to neuron for 20 days
InVitroSystem
Homo sapiens (female) H9 differentiated cell specimen induced to neuron for 11 days
InVitroSystem
Homo sapiens (male) GM25256 (WTC-11) cell line

Institutional Certificates

4 items