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putamen — IGVFSM2861OAVH

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This object is in preview status. Metadata is subject to change until this object is released.
Summary
multiplexed sample: Homo sapiens (female, 86 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (male, 78 years) posterior cingulate gyrus tissue associated with Parkinson's disease; ... and 14 more samples
Multiplexing Method
genetic
Sources
Taxa
Homo sapiens
Aliases
igvf:corces_multiplexedSample_RP013_G3

Donors

16 items
Aliases
  • igvf:corces_donor_BANN1344
female
Homo sapiens
  • igvf:corces_donor_BANN1569
male
Homo sapiens
  • igvf:corces_donor_BANN1827
male
Homo sapiens
  • igvf:corces_donor_BANN0217
female
Homo sapiens
  • igvf:corces_donor_BANN1317
male
Homo sapiens
  • igvf:corces_donor_BANN0325
male
Homo sapiens
  • igvf:corces_donor_BANN1864
male
Homo sapiens
  • igvf:corces_donor_BANN0322
female
Homo sapiens
  • igvf:corces_donor_BANN1632
male
Homo sapiens
  • igvf:corces_donor_BANN1089
female
Homo sapiens

File Sets

2 items
single-nucleus ATAC-seq (10x multiome)
  • igvf:corces_measurementSet_RP013_G3_ATAC
Ryan Corces, Gladstone Institute UCSF
single-nucleus RNA sequencing assay (10x multiome)
  • igvf:corces_measurementSet_RP013_G3_RNA
Ryan Corces, Gladstone Institute UCSF

Multiplexed Samples

16 items
Sample Terms
Disease Terms
Summary
Tissue
Homo sapiens (female, 86 years) substantia nigra tissue associated with Parkinson's disease
Tissue
Homo sapiens (male, 78 years) posterior cingulate gyrus tissue associated with Parkinson's disease
Tissue
Homo sapiens (female, 79 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy
Tissue
Homo sapiens (female, 82 years) putamen tissue associated with Alzheimer disease, Parkinson's disease, cerebral amyloid angiopathy, multiple sclerosis
Tissue
Homo sapiens (male, 89 years) putamen tissue
Tissue
Homo sapiens (male, 72 years) substantia nigra tissue associated with cerebral amyloid angiopathy
Tissue
Homo sapiens (female, 81 years) putamen tissue associated with Parkinson's disease
Tissue
Homo sapiens (male, 79 years) substantia nigra tissue associated with Parkinson's disease, mild cognitive impairment
Tissue
Homo sapiens (male, 79 years) substantia nigra tissue
Tissue
Homo sapiens (female, 80 years) middle temporal gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment

Attribution

Award
HG012076
Principal Investigator(s)
Contact P.I.
Ansuman Satpathy
Lab
Ryan Corces, Gladstone Institute UCSF