H1-hESC — IGVFSM2522EBPE

released

Summary

multiplexed sample: Homo sapiens (male) H1-hESC differentiated cell specimen induced to islet of Langerhans for 18 days; Homo sapiens (male) H1-hESC differentiated cell specimen induced to islet of Langerhans for 7 days; ... and 6 more samples

Multiplexing Method

barcode based

Sources

Danwei Huangfu, MSKCC

Barcode Map

IGVFFI1316HXBQ

Taxa

Homo sapiens

Aliases

ansuman-satpathy:multiplexed_sample_igvf6_10x4

Protocols

https://www.protocols.io/view/multi-seq-for-multiome-igvf-round-2-experiment-1-dfqp3mvn

Attribution

Ansuman Satpathy, Stanford

(

HG012076 — Ansuman Satpathy

)

Donors

1 item

Accession

Aliases

Sex

Taxa

IGVFDO6638HIAD

igvf:donor_of_H1

male

Homo sapiens

File Sets

4 items

IGVFDS0287NOBE

10x multiome with MULTI-seq: cell hashing barcodes, fragments, index, peaks, raw feature barcode matrix

ansuman-satpathy:igvf6_analysis_set_10x4

Ansuman Satpathy, Stanford

IGVFDS4340TUUZ

single-nucleus ATAC-seq (10x multiome with MULTI-seq)

ansuman-satpathy:snATAC-seq_igvf6_10x4

Ansuman Satpathy, Stanford

IGVFDS6424PGVE

single-nucleus RNA sequencing assay (10x multiome with MULTI-seq)

ansuman-satpathy:snRNA-seq_igvf6_10x4

Ansuman Satpathy, Stanford

IGVFDS8391OPLO

lipid-conjugated oligo sequencing for single-nucleus RNA sequencing assay (10x multiome with MULTI-seq), single-nucleus ATAC-seq (10x multiome with MULTI-seq)