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putamen — IGVFSM2378UJCJ

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This object is in preview status. Metadata is subject to change until this object is released.
Summary
multiplexed sample: Homo sapiens (male, 80 years) middle temporal gyrus tissue associated with Alzheimer disease, Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (male, 60 years) putamen tissue associated with Parkinson's disease; ... and 10 more samples
Multiplexing Method
genetic
Sources
Taxa
Homo sapiens
Aliases
igvf:corces_multiplexedSample_X030_G3

Donors

12 items
Aliases
  • igvf:corces_donor_BANN1344
female
Homo sapiens
  • igvf:corces_donor_BANN1584
male
Homo sapiens
  • igvf:corces_donor_BANN1037
female
Homo sapiens
  • igvf:corces_donor_BANN0950
male
Homo sapiens
  • igvf:corces_donor_BANN0348
male
Homo sapiens
  • igvf:corces_donor_BANN0129
male
Homo sapiens
  • igvf:corces_donor_BANN1957
male
Homo sapiens
  • igvf:corces_donor_BANN1814
male
Homo sapiens
  • igvf:corces_donor_BANN1234
male
Homo sapiens
  • igvf:corces_donor_BANN1349
female
Homo sapiens

File Sets

2 items
single-nucleus ATAC-seq (10x multiome)
  • igvf:corces_measurementSet_X030_G3_ATAC
Ryan Corces, Gladstone Institute UCSF
single-nucleus RNA sequencing assay (10x multiome)
  • igvf:corces_measurementSet_X030_G3_RNA
Ryan Corces, Gladstone Institute UCSF

Multiplexed Samples

12 items
Sample Terms
Disease Terms
Summary
Tissue
Homo sapiens (male, 80 years) middle temporal gyrus tissue associated with Alzheimer disease, Parkinson's disease, cerebral amyloid angiopathy
Tissue
Homo sapiens (male, 60 years) putamen tissue associated with Parkinson's disease
Tissue
Homo sapiens (male, 74 years) putamen tissue associated with Parkinson's disease
Tissue
Homo sapiens (male, 81 years) cerebellar cortex tissue associated with Parkinson's disease
Tissue
Homo sapiens (male, 81 years) substantia nigra tissue associated with Parkinson's disease, mild cognitive impairment
Tissue
Homo sapiens (male, 53 years) putamen tissue
Tissue
Homo sapiens (female, 52 years) cerebellar cortex tissue
Tissue
Homo sapiens (male, 90 or above years) posterior cingulate gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy
Tissue
Homo sapiens (female, 75 years) substantia nigra tissue
Tissue
Homo sapiens (female, 88 years) substantia nigra tissue associated with Parkinson's disease, mild cognitive impairment

Attribution

Award
HG012076
Principal Investigator(s)
Contact P.I.
Ansuman Satpathy
Lab
Ryan Corces, Gladstone Institute UCSF