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putamen — IGVFSM2344WXDM

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This object is in preview status. Metadata is subject to change until this object is released.
Summary
multiplexed sample: Homo sapiens (female, 79 years) substantia nigra tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (male, 79 years) cerebellar cortex tissue associated with Alzheimer disease, Parkinson's disease; ... and 10 more samples
Multiplexing Method
genetic
Sources
Taxa
Homo sapiens
Aliases
igvf:corces_multiplexedSample_X043_G7

Donors

12 items
Aliases
  • igvf:corces_donor_BANN1344
female
Homo sapiens
  • igvf:corces_donor_BANN0560
male
Homo sapiens
  • igvf:corces_donor_BANN0002
male
Homo sapiens
  • igvf:corces_donor_BANN1959
male
Homo sapiens
  • igvf:corces_donor_BANN1957
male
Homo sapiens
  • igvf:corces_donor_BANN1329
male
Homo sapiens
  • igvf:corces_donor_BANN1201
male
Homo sapiens
  • igvf:corces_donor_BANN1089
female
Homo sapiens
  • igvf:corces_donor_BANN1812
female
Homo sapiens
  • igvf:corces_donor_BANN0315
male
Homo sapiens

File Sets

2 items
single-nucleus ATAC-seq (10x multiome)
  • igvf:corces_measurementSet_X043_G7_ATAC
Ryan Corces, Gladstone Institute UCSF
single-nucleus RNA sequencing assay (10x multiome)
  • igvf:corces_measurementSet_X043_G7_RNA
Ryan Corces, Gladstone Institute UCSF

Multiplexed Samples

12 items
Sample Terms
Disease Terms
Summary
Tissue
Homo sapiens (female, 79 years) substantia nigra tissue associated with Parkinson's disease, cerebral amyloid angiopathy
Tissue
Homo sapiens (male, 79 years) cerebellar cortex tissue associated with Alzheimer disease, Parkinson's disease
Tissue
Homo sapiens (female, 71 years) middle temporal gyrus tissue associated with Parkinson's disease
Tissue
Homo sapiens (male, 84 years) cerebellar cortex tissue associated with Parkinson's disease
Tissue
Homo sapiens (male, 90 or above years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy
Tissue
Homo sapiens (female, 88 years) middle temporal gyrus tissue associated with Parkinson's disease, mild cognitive impairment
Tissue
Homo sapiens (male, 72 years) substantia nigra tissue associated with Parkinson's disease
Tissue
Homo sapiens (male, 80 years) cerebellar cortex tissue
Tissue
Homo sapiens (female, 81 years) putamen tissue associated with Parkinson's disease
Tissue
Homo sapiens (male, 85 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy

Attribution

Award
HG012076
Principal Investigator(s)
Contact P.I.
Ansuman Satpathy
Lab
Ryan Corces, Gladstone Institute UCSF