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putamen — IGVFSM2056FRDV

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This object is in preview status. Metadata is subject to change until this object is released.
Summary
multiplexed sample: Homo sapiens (male, 78 years) substantia nigra tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment; Homo sapiens (male, 87 years) substantia nigra tissue associated with Parkinson's disease, cerebral amyloid angiopathy; ... and 10 more samples
Multiplexing Method
genetic
Sources
Taxa
Homo sapiens
Aliases
igvf:corces_multiplexedSample_X019_G5

Donors

12 items
Aliases
  • igvf:corces_donor_BANN1851
male
Homo sapiens
  • igvf:corces_donor_BANN1809
male
Homo sapiens
  • igvf:corces_donor_BANN1404
male
Homo sapiens
  • igvf:corces_donor_BANN0413
male
Homo sapiens
  • igvf:corces_donor_BANN1647
male
Homo sapiens
  • igvf:corces_donor_BANN1833
male
Homo sapiens
  • igvf:corces_donor_BANN1632
male
Homo sapiens
  • igvf:corces_donor_BANN1070
male
Homo sapiens
  • igvf:corces_donor_BANN1089
female
Homo sapiens
  • igvf:corces_donor_BANN1235
male
Homo sapiens

File Sets

2 items
single-nucleus ATAC-seq (10x multiome)
  • igvf:corces_measurementSet_X019_G5_ATAC
Ryan Corces, Gladstone Institute UCSF
single-nucleus RNA sequencing assay (10x multiome)
  • igvf:corces_measurementSet_X019_G5_RNA
Ryan Corces, Gladstone Institute UCSF

Multiplexed Samples

12 items
Sample Terms
Disease Terms
Summary
Tissue
Homo sapiens (male, 78 years) substantia nigra tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment
Tissue
Homo sapiens (male, 87 years) substantia nigra tissue associated with Parkinson's disease, cerebral amyloid angiopathy
Tissue
Homo sapiens (male, 69 years) cerebellar cortex tissue associated with Parkinson's disease
Tissue
Homo sapiens (male, 76 years) posterior cingulate gyrus tissue associated with Parkinson's disease
Tissue
Homo sapiens (male, 83 years) putamen tissue associated with Parkinson's disease
Tissue
Homo sapiens (male, 79 years) posterior cingulate gyrus tissue
Tissue
Homo sapiens (male, 72 years) putamen tissue associated with Parkinson's disease
Tissue
Homo sapiens (male, 74 years) middle temporal gyrus tissue
Tissue
Homo sapiens (male, 73 years) middle temporal gyrus tissue associated with Parkinson's disease, mild cognitive impairment
Tissue
Homo sapiens (female, 80 years) cerebellar cortex tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment

Attribution

Award
HG012076
Principal Investigator(s)
Contact P.I.
Ansuman Satpathy
Lab
Ryan Corces, Gladstone Institute UCSF