B cell — IGVFSM1640UGWP

released

Summary

multiplexed sample: Homo sapiens (female) B differentiated cell specimen induced to plasmablast for 6 days; Homo sapiens (female) B differentiated cell specimen induced to plasmablast for 5 days; ... and 10 more samples

Multiplexing Method

barcode based

Sources

Bradley Bernstein, Broad, Harinder Singh, University of Pittsburgh

Taxa

Homo sapiens

Aliases

ansuman-satpathy:multiplexed_sample_igvf12_10x5

Protocols

https://www.protocols.io/view/multi-seq-for-multiome-igvf-round-2-experiment-1-dfqp3mvn

Attribution

Ansuman Satpathy, Stanford

(

HG012076 — Ansuman Satpathy

)

Donors

3 items

Aliases

IGVFDO0938OYMI

ansuman-satpathy:singh_bcell_donor_2

female

Homo sapiens

IGVFDO1264SGCS

ansuman-satpathy:bridge_bone_marrow_donor_2038

male

Homo sapiens

IGVFDO1718HCES

ansuman-satpathy:singh_bcell_donor_1

male

Homo sapiens

File Sets

4 items

IGVFDS0584KNPT

single-nucleus ATAC-seq (10x multiome with MULTI-seq)

ansuman-satpathy:snATAC-seq_igvf12_10x5

Ansuman Satpathy, Stanford

IGVFDS7016ZFVC

single-nucleus ATAC-seq (10x multiome with MULTI-seq), single-nucleus RNA sequencing assay (10x multiome with MULTI-seq): cell hashing barcodes, fragments, index, peaks, raw feature barcode matrix

ansuman-satpathy:igvf12_analysis_set_10x5

Ansuman Satpathy, Stanford

IGVFDS7297BZEA

single-nucleus RNA sequencing assay (10x multiome with MULTI-seq)

ansuman-satpathy:snRNA-seq_igvf12_10x5

Ansuman Satpathy, Stanford

IGVFDS8937ZULR

lipid-conjugated oligo sequencing for single-nucleus ATAC-seq (10x multiome with MULTI-seq), single-nucleus RNA sequencing assay (10x multiome with MULTI-seq)