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putamen — IGVFSM0125OEIT

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This object is in preview status. Metadata is subject to change until this object is released.
Summary
multiplexed sample: Homo sapiens (female, 88 years) putamen tissue associated with Parkinson's disease, mild cognitive impairment; Homo sapiens (male, 80 years) substantia nigra tissue associated with Parkinson's disease; ... and 14 more samples
Multiplexing Method
genetic
Sources
Taxa
Homo sapiens
Aliases
igvf:corces_multiplexedSample_RP021_G6

Donors

16 items
Aliases
  • igvf:corces_donor_BANN1344
female
Homo sapiens
  • igvf:corces_donor_BANN0417
male
Homo sapiens
  • igvf:corces_donor_BANN1404
male
Homo sapiens
  • igvf:corces_donor_BANN2038
male
Homo sapiens
  • igvf:corces_donor_BANN1902
male
Homo sapiens
  • igvf:corces_donor_BANN1311
male
Homo sapiens
  • igvf:corces_donor_BANN1644
male
Homo sapiens
  • igvf:corces_donor_BANN1865
male
Homo sapiens
  • igvf:corces_donor_BANN0912
male
Homo sapiens
  • igvf:corces_donor_BANN1814
male
Homo sapiens

File Sets

2 items
single-nucleus RNA sequencing assay (10x multiome)
  • igvf:corces_measurementSet_RP021_G6_RNA
Ryan Corces, Gladstone Institute UCSF
single-nucleus ATAC-seq (10x multiome)
  • igvf:corces_measurementSet_RP021_G6_ATAC
Ryan Corces, Gladstone Institute UCSF

Multiplexed Samples

16 items
Sample Terms
Disease Terms
Summary
Tissue
Homo sapiens (female, 88 years) putamen tissue associated with Parkinson's disease, mild cognitive impairment
Tissue
Homo sapiens (male, 80 years) substantia nigra tissue associated with Parkinson's disease
Tissue
Homo sapiens (male, 81 years) middle temporal gyrus tissue associated with Parkinson's disease
Tissue
Homo sapiens (male, 69 years) posterior cingulate gyrus tissue associated with Parkinson's disease
Tissue
Homo sapiens (male, 73 years) substantia nigra tissue associated with Parkinson's disease, cerebral amyloid angiopathy
Tissue
Homo sapiens (male, 90 or above years) middle temporal gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy
Tissue
Homo sapiens (male, 78 years) posterior cingulate gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment
Tissue
Homo sapiens (female, 71 years) putamen tissue associated with Parkinson's disease
Tissue
Homo sapiens (male, 83 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy
Tissue
Homo sapiens (male, 81 years) posterior cingulate gyrus tissue associated with Parkinson's disease

Attribution

Award
HG012076
Principal Investigator(s)
Contact P.I.
Ansuman Satpathy
Lab
Ryan Corces, Gladstone Institute UCSF