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IGVFFI6088AFLH

released
validated
File Set
IGVFDS9664YLAD(single-nucleus ATAC-seq (10x multiome with MULTI-seq), single-nucleus RNA sequencing assay (10x multiome with MULTI-seq))
Summary
index of IGVFFI9254IQXZ
Analysis Step Version
/analysis-step-versions/699d6738-4033-4afc-b6f3-1d82a80e0b41/
File Format
tbi
Content Type
index
Aliases
ansuman-satpathy:igvf10_fragments_index_10x2
md5sum
dcdf4989f54c370141b644b44292d116
Content MD5sum
f05d9f7b9bd9fe4b031f9fb27fc8505f
File Size
2.2 MB
Submitted File Name
/oak/stanford/groups/satpathy/users/backup/cmcg/analysis_sets/igvf10/e10l2_fragments.tsv.gz.tbi
Checkfiles Version
v17
Attribution
Ansuman Satpathy, Stanford

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (male) Jurkat cell line treated with 100 ng/mL phorbol 13-acetate 12-myristate for 4 hours, 5 μg/mL T-cell surface glycoprotein CD3 gamma chain for 4 hours; Homo sapiens (female) K562 cell line modified with CRISPRi Sp-dCas9-KOX1-KRAB; ... and 8 more samples

Files This File Derives From

1 item
Accession
File Set
File Format
Content Type
Lab
File Size
Upload Status
tsv
fragments
Ansuman Satpathy, Stanford
8.8 GB
validation exempted