IGVFFI4013LHFQ

released
validated
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9    "accession": "IGVFFI4013LHFQ",
10    "aliases": [
11        "buenrostro-bernstein:IGVFDS7496XAWN_fragment_index"
12    ],
13    "analysis_step_version": "/analysis-step-versions/39c0498d-91f6-42de-8896-2fab1403f032/",
14    "assay_titles": [
15        "SHARE-seq"
16    ],
17    "assembly": "GRCm39",
18    "audit": {},
19    "award": {
20        "@id": "/awards/HG011986/",
21        "component": "mapping"
22    },
23    "checkfiles_version": "v20",
24    "content_md5sum": "36f250c4f3e8719b9fc80918d332aa73",
25    "content_type": "index",
26    "controlled_access": false,
27    "creation_timestamp": "2025-03-27T01:21:12.873111+00:00",
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29        "/tabular-files/IGVFFI5731CAQI/"
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39        "accession": "IGVFDS7496XAWN",
40        "data_use_limitation_summaries": [
41            "no certificate"
42        ],
43        "file_set_type": "intermediate analysis",
44        "samples": [
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46                "@id": "/tissues/IGVFSM1149LLIF/",
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54                "classifications": [
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57                "sample_terms": [
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60                        "status": "released",
61                        "term_name": "brain"
62                    }
63                ],
64                "status": "released",
65                "summary": "Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 432)",
66                "taxa": "Mus musculus"
67            }
68        ],
69        "status": "released",
70        "summary": "single-cell ATAC-seq (SHARE-seq), single-cell RNA sequencing assay (SHARE-seq)"
71    },
72    "file_size": 919861,
73    "filtered": false,
74    "gene_list_for": [],
75    "href": "/index-files/IGVFFI4013LHFQ/@@download/IGVFFI4013LHFQ.tbi",
76    "input_file_for": [],
77    "integrated_in": [],
78    "lab": {
79        "@id": "/labs/jason-buenrostro/",
80        "title": "Jason Buenrostro, Broad"
81    },
82    "loci_list_for": [],
83    "md5sum": "a2d3360fa3c2f5b7c5d60d1b93babbcc",
84    "quality_metrics": [],
85    "release_timestamp": "2025-05-07T20:35:05.979397+00:00",
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87    "schema_version": "1",
88    "status": "released",
89    "submitted_by": {
90        "@id": "/users/c0838247-5022-46cf-a8fa-426e73bf4c94/",
91        "title": "Siddarth Wekhande"
92    },
93    "submitted_file_name": "gs://fc-9649faf8-a4ec-4ca4-a975-498a1707d03c/submissions/1d455597-b132-452b-8b75-bf2db8c76d2e/single_cell_pipeline/f4439f68-837a-444b-9590-bb9736d53f91/call-atac/wf_atac/6ad7d11f-0fd6-4a65-bf7a-f7fa339d9e5c/call-generate_fragments/SS-PKR-432.fragments.tsv.gz.tbi",
94    "summary": "index of IGVFFI5731CAQI",
95    "upload_status": "validated",
96    "uuid": "62e7040a-6ef8-45fc-9930-99b96abf1c8e",
97    "workflow": {
98        "@id": "/workflows/IGVFWF7365VWQV/",
99        "name": "igvf single cell uniform pipeline",
100        "uniform_pipeline": true
101    }
102}