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IGVFFI2011FTLH

released
validated
File Set
IGVFDS2175LLDQ(SUPERSTARR: alignments, index, reporter genomic variant effects, reporter variants)
Summary
index of IGVFFI5082ZFLQ
Analysis Step Version
/analysis-step-versions/cfaab400-714a-45b5-9800-3ff6f9c929c2/
File Format
bai
Content Type
index
Aliases
tim-reddy:starr-seq-rna-bam-bai-k562-P014
md5sum
14288895c49ffb43045571004ff453a0
File Size
4.8 MB
Submitted File Name
/data/reddylab/Alex/IGVF/data_submissions/processed_data/AIM_1_STARR_seq/K562.starrseq.rna.pool14.f3q10.sorted.with_umis.dups_marked.bam.bai
Checkfiles Version
v14
Attribution
Tim Reddy, Duke

Reference Source Details

Genome Assembly
GRCh38

Alignment Details

Filtered
False
Redacted
False

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
Homo sapiens (female) K562 cell line transfected with a reporter library

Files This File Derives From

1 item
Accession
File Set
File Format
Content Type
Lab
File Size
Upload Status
bam
alignments
Tim Reddy, Duke
11 GB
validated