HCT116 — IGVFSM9689GGGO

released

Summary

HCT116 cell line, male, Homo sapiens (sorting details: FACS bin A for 0-10% expression of MYC) treated with 1 μM 5-Phenyl-1H-indole-3-acetic acid for 6 hours, modified with AID system targeting RAD21, CRISPRi Sp-dCas9-KOX1-KRAB, transfected with a guide library

Sample Terms

HCT116

Classification

cell line

Sex

male

Age

unknown

Taxa

Homo sapiens

Sources

atcc

Sorted From Sample

IGVFSM5118IDCI FACS bin A for 0-10% expression of MYC

Aliases

jesse-engreitz:in-vitro-system_CRUDO_MYC-Auxin6hrs-FF2-BinA-PCR1_Rep1_S135

jesse-engreitz:in-vitro-system_CRUDO_MYC-Auxin6hrs-FF2-BinA-PCR1_Rep2_S190

jesse-engreitz:in-vitro-system_CRUDO_MYC-Auxin6hrs-FF2-BinA-PCR2_Rep1_S141

jesse-engreitz:in-vitro-system_CRUDO_MYC-Auxin6hrs-FF2-BinA-PCR2_Rep2_S196

jesse-engreitz:in-vitro-system_CRUDO_MYC-Auxin6hrs-FF2-BinA-PCR3_Rep1_S147

jesse-engreitz:in-vitro-system_CRUDO_MYC-Auxin6hrs-FF2-BinA-PCR3_Rep2_S202

jesse-engreitz:in-vitro-system_CRUDO_MYC-Auxin6hrs-FF2-BinA-PCR4_Rep1_S153

jesse-engreitz:in-vitro-system_CRUDO_MYC-Auxin6hrs-FF2-BinA-PCR4_Rep2_S208

Donors

1 item

Accession

Aliases

Sex

Taxa

IGVFDO0384OZRW

igvf:donor_of_HCT116

male

Homo sapiens

File Sets

4 items

IGVFDS3773NYHJ

gRNA sequencing for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci

jesse-engreitz:auxiliary_CRUDO_MYC-Auxin6hrs-FF2-BinA-PCR1_Rep1_S135
jesse-engreitz:auxiliary_CRUDO_MYC-Auxin6hrs-FF2-BinA-PCR1_Rep2_S190
jesse-engreitz:auxiliary_CRUDO_MYC-Auxin6hrs-FF2-BinA-PCR2_Rep1_S141
jesse-engreitz:auxiliary_CRUDO_MYC-Auxin6hrs-FF2-BinA-PCR2_Rep2_S196
jesse-engreitz:auxiliary_CRUDO_MYC-Auxin6hrs-FF2-BinA-PCR3_Rep1_S147
jesse-engreitz:auxiliary_CRUDO_MYC-Auxin6hrs-FF2-BinA-PCR3_Rep2_S202
jesse-engreitz:auxiliary_CRUDO_MYC-Auxin6hrs-FF2-BinA-PCR4_Rep1_S153
jesse-engreitz:auxiliary_CRUDO_MYC-Auxin6hrs-FF2-BinA-PCR4_Rep2_S208

Jesse Engreitz, Stanford

IGVFDS4544YEQM

CRISPR degradation, interference FlowFISH screen targeting MYC: differential element quantifications

jesse-engreitz:analysis_set_CRUDO_MYC

Jesse Engreitz, Stanford

IGVFDS5394TNHK

cell sorting for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci, mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci, ... and 4 more measurement sets