HCT116 — IGVFSM9056QVLB

released

Summary

HCT116 cell line, male, Homo sapiens (sorting details: FACS bin B for 10-20% expression of FAM3C) treated with 1 μM 5-Phenyl-1H-indole-3-acetic acid for 6 hours, modified with AID system targeting RAD21, CRISPRi Sp-dCas9-KOX1-KRAB, transfected with a guide library

Sample Terms

HCT116

Classification

cell line

Sex

male

Age

unknown

Taxa

Homo sapiens

Sources

atcc

Sorted From Sample

IGVFSM4608EHIU FACS bin B for 10-20% expression of FAM3C

Aliases

jesse-engreitz:in-vitro-system_CRUDO_FAM3C_Auxin6hrs-FF1-BinB-PCR1-Rep1_S134

jesse-engreitz:in-vitro-system_CRUDO_FAM3C_Auxin6hrs-FF1-BinB-PCR2-Rep1_S140

jesse-engreitz:in-vitro-system_CRUDO_FAM3C_Auxin6hrs-FF1-BinB-PCR3-Rep1_S188

jesse-engreitz:in-vitro-system_CRUDO_FAM3C_Auxin6hrs-FF1-BinB-PCR4-Rep1_S194

Donors

1 item

Accession

Aliases

Sex

Taxa

IGVFDO0384OZRW

igvf:donor_of_HCT116

male

Homo sapiens

File Sets

4 items

IGVFDS2171ROQP

mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci

jesse-engreitz:measurement_CRUDO_FAM3C_Auxin6hrs-FF1-BinB-PCR1-Rep1_S134
jesse-engreitz:measurement_CRUDO_FAM3C_Auxin6hrs-FF1-BinB-PCR2-Rep1_S140
jesse-engreitz:measurement_CRUDO_FAM3C_Auxin6hrs-FF1-BinB-PCR3-Rep1_S188
jesse-engreitz:measurement_CRUDO_FAM3C_Auxin6hrs-FF1-BinB-PCR4-Rep1_S194

Jesse Engreitz, Stanford

IGVFDS5239VQTN

CRISPR degradation, interference FlowFISH screen targeting FAM3C: differential element quantifications

jesse-engreitz:analysis_set_CRUDO_FAM3C

Jesse Engreitz, Stanford

IGVFDS6385IAUC

gRNA sequencing for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci

jesse-engreitz:auxiliary_CRUDO_FAM3C_Auxin6hrs-FF1-BinB-PCR1-Rep1_S134
jesse-engreitz:auxiliary_CRUDO_FAM3C_Auxin6hrs-FF1-BinB-PCR2-Rep1_S140
jesse-engreitz:auxiliary_CRUDO_FAM3C_Auxin6hrs-FF1-BinB-PCR3-Rep1_S188
jesse-engreitz:auxiliary_CRUDO_FAM3C_Auxin6hrs-FF1-BinB-PCR4-Rep1_S194

Jesse Engreitz, Stanford

IGVFDS9190KTAF

cell sorting for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci, mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci, ... and 4 more measurement sets