B cell — IGVFSM8508IZKU

preview
1{
2    "@context": "/terms/",
3    "@id": "/in-vitro-systems/IGVFSM8508IZKU/",
4    "@type": [
5        "InVitroSystem",
6        "Biosample",
7        "Sample",
8        "Item"
9    ],
10    "accession": "IGVFSM8508IZKU",
11    "age": "33",
12    "age_units": "year",
13    "aliases": [
14        "harinder-singh:D4_activated_Bcells_scRNAseq"
15    ],
16    "audit": {},
17    "award": {
18        "@id": "/awards/HG012041/",
19        "component": "networks"
20    },
21    "cell_fate_change_protocol": "/documents/94d33267-3f2b-4493-84b3-6892427d2611/",
22    "classifications": [
23        "differentiated cell specimen"
24    ],
25    "creation_timestamp": "2024-09-20T19:59:47.358292+00:00",
26    "demultiplexed_to": [],
27    "donors": [
28        {
29            "@id": "/human-donors/IGVFDO9916UELD/",
30            "accession": "IGVFDO9916UELD",
31            "ethnicities": [
32                "African American"
33            ],
34            "status": "preview"
35        }
36    ],
37    "file_sets": [
38        {
39            "@id": "/measurement-sets/IGVFDS2610IANK/",
40            "accession": "IGVFDS2610IANK",
41            "aliases": [
42                "harinder-singh:Bcells_don1_scRNAseq_measurement"
43            ],
44            "file_set_type": "experimental data",
45            "lab": {
46                "title": "Harinder Singh, University of Pittsburgh"
47            },
48            "preferred_assay_title": "scRNA-seq",
49            "status": "preview",
50            "summary": "scRNA-seq"
51        },
52        {
53            "@id": "/analysis-sets/IGVFDS9167HYTZ/",
54            "accession": "IGVFDS9167HYTZ",
55            "aliases": [
56                "harinder-singh:Bcells_don1_scRNAseq_measurement_analysis_set"
57            ],
58            "file_set_type": "intermediate analysis",
59            "lab": {
60                "title": "Harinder Singh, University of Pittsburgh"
61            },
62            "status": "preview",
63            "summary": "scRNA-seq: filtered feature barcode matrix"
64        },
65        {
66            "@id": "/analysis-sets/IGVFDS8726NVTD/",
67            "accession": "IGVFDS8726NVTD",
68            "aliases": [
69                "harinder-singh:AnalysisSet_measurement-IGVFDS2610IANK_sc-uniform-pipeline"
70            ],
71            "file_set_type": "intermediate analysis",
72            "lab": {
73                "title": "Harinder Singh, University of Pittsburgh"
74            },
75            "status": "in progress",
76            "summary": "scRNA-seq"
77        },
78        {
79            "@id": "/analysis-sets/IGVFDS3787XLRV/",
80            "accession": "IGVFDS3787XLRV",
81            "aliases": [
82                "harinder-singh:Bcells_don1_scRNAseq_principal_analysis"
83            ],
84            "file_set_type": "principal analysis",
85            "lab": {
86                "title": "Harinder Singh, University of Pittsburgh"
87            },
88            "status": "preview",
89            "summary": "scRNA-seq: sparse gene count matrix"
90        }
91    ],
92    "institutional_certificates": [
93        {
94            "@id": "/institutional-certificates/4786e123-f40d-4b08-aa06-b5f35e9cc453/",
95            "certificate_identifier": "IP108-01",
96            "controlled_access": true,
97            "data_use_limitation": "HMB",
98            "data_use_limitation_summary": "HMB",
99            "status": "in progress"
100        }
101    ],
102    "lab": {
103        "@id": "/labs/harinder-singh/",
104        "title": "Harinder Singh, University of Pittsburgh"
105    },
106    "lower_bound_age": 33,
107    "lower_bound_age_in_hours": 289080,
108    "multiplexed_in": [
109        {
110            "@id": "/multiplexed-samples/IGVFSM8130GPCI/",
111            "accession": "IGVFSM8130GPCI",
112            "status": "preview"
113        }
114    ],
115    "origin_of": [],
116    "originated_from": {
117        "@id": "/primary-cells/IGVFSM7892QIPY/",
118        "accession": "IGVFSM7892QIPY",
119        "status": "preview"
120    },
121    "parts": [],
122    "pooled_in": [],
123    "sample_terms": [
124        {
125            "@id": "/sample-terms/CL_0000236/",
126            "status": "released",
127            "term_name": "B cell"
128        }
129    ],
130    "schema_version": "27",
131    "sex": "male",
132    "sorted_fractions": [],
133    "sources": [
134        {
135            "@id": "/sources/stem-cell-technologies/",
136            "status": "released",
137            "title": "STEMCELL Technologies"
138        }
139    ],
140    "status": "preview",
141    "submitted_by": {
142        "@id": "/users/d2668d67-5e6f-49e8-82ca-7bb12229f892/",
143        "title": "Nicholas Pease"
144    },
145    "summary": "Homo sapiens (male) B differentiated cell specimen induced to plasmablast for 4 days",
146    "targeted_sample_term": {
147        "@id": "/sample-terms/CL_0000980/",
148        "status": "released",
149        "term_name": "plasmablast"
150    },
151    "taxa": "Homo sapiens",
152    "time_post_change": 4,
153    "time_post_change_units": "day",
154    "upper_bound_age": 33,
155    "upper_bound_age_in_hours": 289080,
156    "uuid": "8559a0ce-d55c-4be1-920e-c5bfd004d13a",
157    "virtual": false
158}