HCT116 — IGVFSM4779RXHT

released

Summary

HCT116 cell line, male, Homo sapiens (sorting details: FACS bin B for 10-20% expression of CCND1) modified with CRISPRi Sp-dCas9-KOX1-KRAB, inactive AID system targeting RAD21, transfected with a guide library

Sample Terms

HCT116

Classification

cell line

Sex

male

Age

unknown

Taxa

Homo sapiens

Sources

atcc

Sorted From Sample

IGVFSM7957SEYT FACS bin B for 10-20% expression of CCND1

Aliases

jesse-engreitz:in-vitro-system_CRUDO_CCND1_Auxin0hrs-FF1-BinB-PCR1-Rep1_S218

jesse-engreitz:in-vitro-system_CRUDO_CCND1_Auxin0hrs-FF1-BinB-PCR2-Rep1_S224

jesse-engreitz:in-vitro-system_CRUDO_CCND1_Auxin0hrs-FF1-BinB-PCR3-Rep1_S260

jesse-engreitz:in-vitro-system_CRUDO_CCND1_Auxin0hrs-FF1-BinB-PCR4-Rep1_S266

Donors

1 item

Accession

Aliases

Sex

Taxa

IGVFDO0384OZRW

igvf:donor_of_HCT116

male

Homo sapiens

File Sets

4 items

IGVFDS1569RNPD

CRISPR degradation, interference FlowFISH screen targeting CCND1: differential element quantifications

jesse-engreitz:analysis_set_CRUDO_CCND1

Jesse Engreitz, Stanford

IGVFDS3348ANJX

gRNA sequencing for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci

jesse-engreitz:auxiliary_CRUDO_CCND1_Auxin0hrs-FF1-BinB-PCR1-Rep1_S218
jesse-engreitz:auxiliary_CRUDO_CCND1_Auxin0hrs-FF1-BinB-PCR2-Rep1_S224
jesse-engreitz:auxiliary_CRUDO_CCND1_Auxin0hrs-FF1-BinB-PCR3-Rep1_S260
jesse-engreitz:auxiliary_CRUDO_CCND1_Auxin0hrs-FF1-BinB-PCR4-Rep1_S266

Jesse Engreitz, Stanford

IGVFDS5464XLTY

cell sorting for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci, mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci, ... and 4 more measurement sets