HCT116 — IGVFSM2684MUBP

released
Summary
HCT116 cell line, male, Homo sapiens (sorting details: FACS bin C for 35-45% expression of KITLG) modified with CRISPRi Sp-dCas9-KOX1-KRAB, inactive AID system targeting RAD21, transfected with a guide library
Sample Terms
Classification
cell line
Sex
male
Age
unknown
Taxa
Homo sapiens
Sources
Sorted From Sample
IGVFSM4493UPPK FACS bin C for 35-45% expression of KITLG
Aliases
jesse-engreitz:in-vitro-system_CRUDO_KITLG-Auxin0hrs-FF1-BinC-PCR1_S3
jesse-engreitz:in-vitro-system_CRUDO_KITLG-Auxin0hrs-FF1-BinC-PCR2_S9
jesse-engreitz:in-vitro-system_CRUDO_KITLG-Auxin0hrs-FF1-BinC-PCR3_S99
jesse-engreitz:in-vitro-system_CRUDO_KITLG-Auxin0hrs-FF1-BinC-PCR4_S105

Donors

1 item
Accession
Aliases
Sex
Taxa
  • igvf:donor_of_HCT116
male
Homo sapiens

File Sets

4 items
CRISPR degradation, interference FlowFISH screen targeting KITLG: differential element quantifications
  • jesse-engreitz:analysis_set_CRUDO_KITLG
Jesse Engreitz, Stanford
mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
  • jesse-engreitz:measurement_CRUDO_KITLG-Auxin0hrs-FF1-BinC-PCR1_S3
  • jesse-engreitz:measurement_CRUDO_KITLG-Auxin0hrs-FF1-BinC-PCR2_S9
  • jesse-engreitz:measurement_CRUDO_KITLG-Auxin0hrs-FF1-BinC-PCR3_S99
  • jesse-engreitz:measurement_CRUDO_KITLG-Auxin0hrs-FF1-BinC-PCR4_S105
Jesse Engreitz, Stanford
gRNA sequencing for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
  • jesse-engreitz:auxiliary_CRUDO_KITLG-Auxin0hrs-FF1-BinC-PCR1_S3
  • jesse-engreitz:auxiliary_CRUDO_KITLG-Auxin0hrs-FF1-BinC-PCR2_S9
  • jesse-engreitz:auxiliary_CRUDO_KITLG-Auxin0hrs-FF1-BinC-PCR3_S99
  • jesse-engreitz:auxiliary_CRUDO_KITLG-Auxin0hrs-FF1-BinC-PCR4_S105
Jesse Engreitz, Stanford
cell sorting for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci, mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci, ... and 4 more measurement sets
  • jesse-engreitz:auxiliary_sortparams_CRUDO_KITLG-Auxin0hrs-FF1
Jesse Engreitz, Stanford

Modifications

2 items

Documents

Attribution