HCT116 — IGVFSM2548FJWP

released

Summary

HCT116 cell line, male, Homo sapiens (sorting details: FACS bin E for 80-90% expression of MYC) treated with 1 μM 5-Phenyl-1H-indole-3-acetic acid for 6 hours, modified with AID system targeting RAD21, CRISPRi Sp-dCas9-KOX1-KRAB, transfected with a guide library

Sample Terms

HCT116

Classification

cell line

Sex

male

Age

unknown

Taxa

Homo sapiens

Sources

atcc

Sorted From Sample

IGVFSM5118IDCI FACS bin E for 80-90% expression of MYC

Aliases

jesse-engreitz:in-vitro-system_CRUDO_MYC-Auxin6hrs-FF2-BinE-PCR1_Rep1_S139

jesse-engreitz:in-vitro-system_CRUDO_MYC-Auxin6hrs-FF2-BinE-PCR1_Rep2_S194

jesse-engreitz:in-vitro-system_CRUDO_MYC-Auxin6hrs-FF2-BinE-PCR2_Rep1_S145

jesse-engreitz:in-vitro-system_CRUDO_MYC-Auxin6hrs-FF2-BinE-PCR2_Rep2_S200

jesse-engreitz:in-vitro-system_CRUDO_MYC-Auxin6hrs-FF2-BinE-PCR3_Rep1_S151

jesse-engreitz:in-vitro-system_CRUDO_MYC-Auxin6hrs-FF2-BinE-PCR3_Rep2_S206

jesse-engreitz:in-vitro-system_CRUDO_MYC-Auxin6hrs-FF2-BinE-PCR4_Rep1_S157

jesse-engreitz:in-vitro-system_CRUDO_MYC-Auxin6hrs-FF2-BinE-PCR4_Rep2_S212

Donors

1 item

Accession

Aliases

Sex

Taxa

IGVFDO0384OZRW

igvf:donor_of_HCT116

male

Homo sapiens

File Sets

4 items

IGVFDS1748WPZO

gRNA sequencing for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci

jesse-engreitz:auxiliary_CRUDO_MYC-Auxin6hrs-FF2-BinE-PCR1_Rep1_S139
jesse-engreitz:auxiliary_CRUDO_MYC-Auxin6hrs-FF2-BinE-PCR1_Rep2_S194
jesse-engreitz:auxiliary_CRUDO_MYC-Auxin6hrs-FF2-BinE-PCR2_Rep1_S145
jesse-engreitz:auxiliary_CRUDO_MYC-Auxin6hrs-FF2-BinE-PCR2_Rep2_S200
jesse-engreitz:auxiliary_CRUDO_MYC-Auxin6hrs-FF2-BinE-PCR3_Rep1_S151
jesse-engreitz:auxiliary_CRUDO_MYC-Auxin6hrs-FF2-BinE-PCR3_Rep2_S206
jesse-engreitz:auxiliary_CRUDO_MYC-Auxin6hrs-FF2-BinE-PCR4_Rep1_S157
jesse-engreitz:auxiliary_CRUDO_MYC-Auxin6hrs-FF2-BinE-PCR4_Rep2_S212

Jesse Engreitz, Stanford

IGVFDS4544YEQM

CRISPR degradation, interference FlowFISH screen targeting MYC: differential element quantifications

jesse-engreitz:analysis_set_CRUDO_MYC

Jesse Engreitz, Stanford

IGVFDS5394TNHK

cell sorting for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci, mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci, ... and 4 more measurement sets