HCT116 — IGVFSM1961BHPA

released
Summary
HCT116 cell line, male, Homo sapiens (sorting details: FACS bin D for 55-65% expression of KITLG) modified with CRISPRi Sp-dCas9-KOX1-KRAB, inactive AID system targeting RAD21, transfected with a guide library
Sample Terms
Classification
cell line
Sex
male
Age
unknown
Taxa
Homo sapiens
Sources
Sorted From Sample
IGVFSM7783ZWAR FACS bin D for 55-65% expression of KITLG
Aliases
jesse-engreitz:in-vitro-system_CRUDO_KITLG-Auxin0hrs-FF4-BinD-PCR1_S40
jesse-engreitz:in-vitro-system_CRUDO_KITLG-Auxin0hrs-FF4-BinD-PCR2_S46
jesse-engreitz:in-vitro-system_CRUDO_KITLG-Auxin0hrs-FF4-BinD-PCR3_S136
jesse-engreitz:in-vitro-system_CRUDO_KITLG-Auxin0hrs-FF4-BinD-PCR4_S142

Donors

1 item
Accession
Aliases
Sex
Taxa
  • igvf:donor_of_HCT116
male
Homo sapiens

File Sets

4 items
mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
  • jesse-engreitz:measurement_CRUDO_KITLG-Auxin0hrs-FF4-BinD-PCR1_S40
  • jesse-engreitz:measurement_CRUDO_KITLG-Auxin0hrs-FF4-BinD-PCR2_S46
  • jesse-engreitz:measurement_CRUDO_KITLG-Auxin0hrs-FF4-BinD-PCR3_S136
  • jesse-engreitz:measurement_CRUDO_KITLG-Auxin0hrs-FF4-BinD-PCR4_S142
Jesse Engreitz, Stanford
cell sorting for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci, mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci, ... and 4 more measurement sets
  • jesse-engreitz:auxiliary_sortparams_CRUDO_KITLG-Auxin0hrs-FF4
Jesse Engreitz, Stanford
gRNA sequencing for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
  • jesse-engreitz:auxiliary_CRUDO_KITLG-Auxin0hrs-FF4-BinD-PCR1_S40
  • jesse-engreitz:auxiliary_CRUDO_KITLG-Auxin0hrs-FF4-BinD-PCR2_S46
  • jesse-engreitz:auxiliary_CRUDO_KITLG-Auxin0hrs-FF4-BinD-PCR3_S136
  • jesse-engreitz:auxiliary_CRUDO_KITLG-Auxin0hrs-FF4-BinD-PCR4_S142
Jesse Engreitz, Stanford
CRISPR degradation, interference FlowFISH screen targeting KITLG: differential element quantifications
  • jesse-engreitz:analysis_set_CRUDO_KITLG
Jesse Engreitz, Stanford

Modifications

2 items

Documents

Attribution