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GM25256 (WTC-11) — IGVFSM1839OFIJ

released
Summary
GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 42 days, male, Homo sapiens treated with 1 μM Endothelin-1 for 3 days, transfected with a guide library
Sample Terms
Classification
differentiated cell specimen
Sex
male
Age
unknown
Time Post Change
42 day
Cell Fate Change Protocol
WTC and Cardiomyocytes Protocol.pdf
Construct Library Sets
  • IGVFDS5972DQKC guide (sgRNA) library targeting accessible genome regions in a genomic locus
Taxa
Homo sapiens
Sources
Charles Gersbach, Duke
Aliases
charles-gersbach:in-vitro-system-crispra-region3-1umET1-ipsc-cm-targeted-hicar-rep2
Institutional Certificates

Donors

1 item
Accession
Aliases
Sex
Taxa
  • igvf:donor_of_WTC11
male
Homo sapiens

File Sets

4 items
HiCAR: contact matrix
  • charles-gersbach:analysis-set-crispra-region3-1umET1-ipsc-cm-targeted-hicar-rep2-cool
Charles Gersbach, Duke
CRISPR HiCAR integrating a guide (sgRNA) library targeting accessible genome regions in a genomic locus
  • charles-gersbach:measurement-set-crispra-region3-1umET1-ipsc-cm-targeted-hicar-rep2
Charles Gersbach, Duke
HiCAR: bin paired count, differential chromatin contact quantifications
  • charles-gersbach:analysis-set-crispra-stim-NT-region3-DEanalysis
Charles Gersbach, Duke
HiCAR: bin paired count, differential chromatin contact quantifications
  • charles-gersbach:analysis-set-crispra-stim-ctrl-region3-DEanalysis
Charles Gersbach, Duke

Treatments

1 item
Term Name
Purpose
Type
Summary
perturbation
chemical
Treatment of 1 μM Endothelin-1 for 3 days

Attribution

Award
HG012053
Principal Investigator(s)
Contact P.I.
Charles Gersbach
Lab
Charles Gersbach, Duke