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H9 — IGVFSM1063UQVF

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Summary
Homo sapiens (female) H9 differentiated cell specimen induced to cardiac muscle cell for 12 days (cellular sub pool: subpool_LW273) modified with CRISPRi Sp-dCas9, 3 week(s) after transfection with a guide library
Sample Terms
Classification
differentiated cell specimen
Sex
female
Cellular Sub Pool
subpool_LW273
Originated From Sample
IGVFSM3927QOQT
Age
unknown
Part of Sample
IGVFSM1649MDAH
Targeted Sample Term
cardiac muscle cell
Time Post Change
12 day
Cell Fate Change Protocol
Protocol-hPSC-CM-differentiation-protocol-DRAFTv2.1.pdf
Construct Library Sets
  • IGVFDS9629YZLO guide (sgRNA) library targeting accessible genome regions in many genomic loci
Taxa
Homo sapiens
Sources
Gary Hon, UT
Aliases
gary-hon:differentiated_H9_shen_construct_sgRNA_PB_LW273
Attribution
Gary Hon, UT

Donors

1 item
Accession
Aliases
Sex
Taxa
  • igvf:donor_of_H9
female
Homo sapiens

File Sets

4 items
CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
  • gary-hon:CM_Pilot_2_Mini_PB_LW273
Gary Hon, UT
interference Perturb-seq: filtered feature barcode matrix, raw feature barcode matrix, sparse gene count matrix
  • gary-hon:H9_shen_construct_sgRNA_PB_PrimaryAnalysis
Gary Hon, UT
gRNA sequencing for CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
  • gary-hon:CM_Pilot_2_Mini_sgRNA_PB_LW273
Gary Hon, UT
cell hashing barcode sequencing for CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
  • gary-hon:CM_Pilot_2_Mini_HTO_PB_LW273
Gary Hon, UT

Modifications

1 item
Summary
Modality
Activation
interference

Documents