{
"@context": "/terms/",
"@id": "/in-vitro-systems/IGVFSM0700KOZX/",
"@type": [
"InVitroSystem",
"Biosample",
"Sample",
"Item"
],
"accession": "IGVFSM0700KOZX",
"age": "unknown",
"aliases": [
"buenrostro-bernstein:BioSam 4883_SS-PKR 207"
],
"audit": {
"INTERNAL_ACTION": [
{
"category": "missing publication",
"detail": "In vitro system [IGVFSM0700KOZX](/in-vitro-systems/IGVFSM0700KOZX/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_sample_missing_publication",
"path": "/in-vitro-systems/IGVFSM0700KOZX/"
}
]
},
"award": {
"@id": "/awards/HG011986/",
"component": "mapping"
},
"cell_fate_change_protocol": "/documents/09cd43b1-0727-409b-a6da-c4004d7de732/",
"cellular_sub_pool": "SS-PKR 207",
"classifications": [
"pooled cell specimen",
"differentiated cell specimen"
],
"creation_timestamp": "2024-08-20T14:51:27.839114+00:00",
"demultiplexed_to": [],
"donors": [
{
"@id": "/human-donors/IGVFDO5885PQJM/",
"accession": "IGVFDO5885PQJM",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO2649JQXX/",
"accession": "IGVFDO2649JQXX",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO1533MKVB/",
"accession": "IGVFDO1533MKVB",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO8124AYVF/",
"accession": "IGVFDO8124AYVF",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO3469EFJR/",
"accession": "IGVFDO3469EFJR",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO9942ECYN/",
"accession": "IGVFDO9942ECYN",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO8979DYIF/",
"accession": "IGVFDO8979DYIF",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO8776OLQD/",
"accession": "IGVFDO8776OLQD",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO0436YOXD/",
"accession": "IGVFDO0436YOXD",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO3154SUBV/",
"accession": "IGVFDO3154SUBV",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO9115TZAP/",
"accession": "IGVFDO9115TZAP",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO3385RWXZ/",
"accession": "IGVFDO3385RWXZ",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO2674JORG/",
"accession": "IGVFDO2674JORG",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO2605TXDO/",
"accession": "IGVFDO2605TXDO",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO6183QMMP/",
"accession": "IGVFDO6183QMMP",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO6156FWSA/",
"accession": "IGVFDO6156FWSA",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO2318JQUM/",
"accession": "IGVFDO2318JQUM",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO9956LYMG/",
"accession": "IGVFDO9956LYMG",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO5150ROJL/",
"accession": "IGVFDO5150ROJL",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO2476MGFK/",
"accession": "IGVFDO2476MGFK",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO9907ZZVD/",
"accession": "IGVFDO9907ZZVD",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO7018SAYO/",
"accession": "IGVFDO7018SAYO",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO2588YUMG/",
"accession": "IGVFDO2588YUMG",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO4974JBDF/",
"accession": "IGVFDO4974JBDF",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO0417TJMX/",
"accession": "IGVFDO0417TJMX",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO5566VPJU/",
"accession": "IGVFDO5566VPJU",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO0211CZWE/",
"accession": "IGVFDO0211CZWE",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO4747GRSS/",
"accession": "IGVFDO4747GRSS",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO9164SEDG/",
"accession": "IGVFDO9164SEDG",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO2540COFN/",
"accession": "IGVFDO2540COFN",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO2811ZFFP/",
"accession": "IGVFDO2811ZFFP",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO3633ISAY/",
"accession": "IGVFDO3633ISAY",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO6704QEET/",
"accession": "IGVFDO6704QEET",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO6296JPHU/",
"accession": "IGVFDO6296JPHU",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO4449DKJZ/",
"accession": "IGVFDO4449DKJZ",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO6331OQFD/",
"accession": "IGVFDO6331OQFD",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO4041WUVL/",
"accession": "IGVFDO4041WUVL",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO8886WODZ/",
"accession": "IGVFDO8886WODZ",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO4207CTJX/",
"accession": "IGVFDO4207CTJX",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO1279HYUU/",
"accession": "IGVFDO1279HYUU",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO8663MIYC/",
"accession": "IGVFDO8663MIYC",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO9815AMKV/",
"accession": "IGVFDO9815AMKV",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO5473XXFQ/",
"accession": "IGVFDO5473XXFQ",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO3006ZNMC/",
"accession": "IGVFDO3006ZNMC",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO3010FULG/",
"accession": "IGVFDO3010FULG",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO9261YIGN/",
"accession": "IGVFDO9261YIGN",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO7506JTFC/",
"accession": "IGVFDO7506JTFC",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO3652LJLN/",
"accession": "IGVFDO3652LJLN",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO9079MLOT/",
"accession": "IGVFDO9079MLOT",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO2166LUJJ/",
"accession": "IGVFDO2166LUJJ",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO6075RUJJ/",
"accession": "IGVFDO6075RUJJ",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO8271RBMD/",
"accession": "IGVFDO8271RBMD",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO0279GJBF/",
"accession": "IGVFDO0279GJBF",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO2583SIHN/",
"accession": "IGVFDO2583SIHN",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO1363RREJ/",
"accession": "IGVFDO1363RREJ",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO3560WDAC/",
"accession": "IGVFDO3560WDAC",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO4092SMML/",
"accession": "IGVFDO4092SMML",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO2893BVNI/",
"accession": "IGVFDO2893BVNI",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO0123YZDN/",
"accession": "IGVFDO0123YZDN",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO8042WODZ/",
"accession": "IGVFDO8042WODZ",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO5869XCBR/",
"accession": "IGVFDO5869XCBR",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO0980QZSD/",
"accession": "IGVFDO0980QZSD",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO8033HKMP/",
"accession": "IGVFDO8033HKMP",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO5046RYOV/",
"accession": "IGVFDO5046RYOV",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO5669IKNL/",
"accession": "IGVFDO5669IKNL",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO9835EEAJ/",
"accession": "IGVFDO9835EEAJ",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO0948FTCE/",
"accession": "IGVFDO0948FTCE",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO8459PAOB/",
"accession": "IGVFDO8459PAOB",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO5249VKYA/",
"accession": "IGVFDO5249VKYA",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO2217VSIY/",
"accession": "IGVFDO2217VSIY",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO5934RGQS/",
"accession": "IGVFDO5934RGQS",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO4923LWHA/",
"accession": "IGVFDO4923LWHA",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO8195QBTP/",
"accession": "IGVFDO8195QBTP",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO3701XUXY/",
"accession": "IGVFDO3701XUXY",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO4761JIBM/",
"accession": "IGVFDO4761JIBM",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO8004EZUP/",
"accession": "IGVFDO8004EZUP",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO0508COBR/",
"accession": "IGVFDO0508COBR",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO9770WYQG/",
"accession": "IGVFDO9770WYQG",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO4048DUKN/",
"accession": "IGVFDO4048DUKN",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO1467HGMO/",
"accession": "IGVFDO1467HGMO",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO4924NHKE/",
"accession": "IGVFDO4924NHKE",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO5859XGBW/",
"accession": "IGVFDO5859XGBW",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO3082FYQJ/",
"accession": "IGVFDO3082FYQJ",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO5920NCRK/",
"accession": "IGVFDO5920NCRK",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO4283QEWA/",
"accession": "IGVFDO4283QEWA",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO1255IJEH/",
"accession": "IGVFDO1255IJEH",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO9561MSAD/",
"accession": "IGVFDO9561MSAD",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO6338EGAL/",
"accession": "IGVFDO6338EGAL",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO7991MYZO/",
"accession": "IGVFDO7991MYZO",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO9063CMXP/",
"accession": "IGVFDO9063CMXP",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO6064BKKJ/",
"accession": "IGVFDO6064BKKJ",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO1512EGWF/",
"accession": "IGVFDO1512EGWF",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO1064GZAS/",
"accession": "IGVFDO1064GZAS",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO3115AJIV/",
"accession": "IGVFDO3115AJIV",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO3881ZKMA/",
"accession": "IGVFDO3881ZKMA",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO7384GLJG/",
"accession": "IGVFDO7384GLJG",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO1417AZJE/",
"accession": "IGVFDO1417AZJE",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO4983SZXB/",
"accession": "IGVFDO4983SZXB",
"status": "released"
},
{
"@id": "/human-donors/IGVFDO2967OWUY/",
"accession": "IGVFDO2967OWUY",
"status": "released"
}
],
"file_sets": [
{
"@id": "/measurement-sets/IGVFDS3629MIXK/",
"accession": "IGVFDS3629MIXK",
"aliases": [
"buenrostro-bernstein:scATAC Lib 599"
],
"file_set_type": "experimental data",
"lab": {
"title": "Jason Buenrostro, Broad"
},
"preferred_assay_title": "SHARE-seq",
"status": "released",
"summary": "single-cell ATAC-seq (SHARE-seq)"
},
{
"@id": "/measurement-sets/IGVFDS2412LLJQ/",
"accession": "IGVFDS2412LLJQ",
"aliases": [
"buenrostro-bernstein:scRNA Lib 242"
],
"file_set_type": "experimental data",
"lab": {
"title": "Jason Buenrostro, Broad"
},
"preferred_assay_title": "SHARE-seq",
"status": "released",
"summary": "single-cell RNA sequencing assay (SHARE-seq)"
},
{
"@id": "/analysis-sets/IGVFDS0089LLPR/",
"accession": "IGVFDS0089LLPR",
"aliases": [
"buenrostro-bernstein:AnalysisSet_BioSam-4883_SS-PKR-207"
],
"file_set_type": "intermediate analysis",
"lab": {
"title": "Jason Buenrostro, Broad"
},
"status": "in progress",
"summary": "SHARE-seq"
}
],
"institutional_certificates": [
{
"@id": "/institutional-certificates/26d0a66b-5c86-4326-b305-806fb13d2ae5/",
"certificate_identifier": "IP113-01",
"controlled_access": true,
"data_use_limitation": "GRU",
"status": "released"
},
{
"@id": "/institutional-certificates/31aa03ce-8ec8-409b-8a6c-c115297c10f4/",
"certificate_identifier": "IP113-02",
"controlled_access": true,
"data_use_limitation": "GRU",
"status": "released"
},
{
"@id": "/institutional-certificates/07b1e07f-a66a-4bd5-9c1a-a8632e734789/",
"certificate_identifier": "IP113-03",
"controlled_access": true,
"data_use_limitation": "GRU",
"status": "released"
},
{
"@id": "/institutional-certificates/3c3d7aa1-227e-43c8-8c68-2d3ad8e280b9/",
"certificate_identifier": "IP113-04",
"controlled_access": true,
"data_use_limitation": "GRU",
"status": "released"
},
{
"@id": "/institutional-certificates/dff99f30-9e29-4410-bdb4-eed4b70432cf/",
"certificate_identifier": "IP113-05",
"controlled_access": true,
"data_use_limitation": "GRU",
"status": "released"
},
{
"@id": "/institutional-certificates/10318039-d9e6-4dd0-8d92-4c551493b9fe/",
"certificate_identifier": "IP113-06",
"controlled_access": true,
"data_use_limitation": "GRU",
"status": "released"
},
{
"@id": "/institutional-certificates/32e245d0-ae4b-4334-b826-ed5bf00f111f/",
"certificate_identifier": "IP113-07",
"controlled_access": true,
"data_use_limitation": "GRU",
"status": "released"
},
{
"@id": "/institutional-certificates/35c8ed2e-cf1b-4cdd-a6ee-e766e7c3d954/",
"certificate_identifier": "IP113-08",
"controlled_access": true,
"data_use_limitation": "GRU",
"status": "released"
},
{
"@id": "/institutional-certificates/70134af2-c4fd-43b4-96a6-9133a119a715/",
"certificate_identifier": "IP113-09",
"controlled_access": true,
"data_use_limitation": "GRU",
"status": "released"
},
{
"@id": "/institutional-certificates/8a10acc0-7e24-4912-8833-10141ccf9b5f/",
"certificate_identifier": "IP113-10",
"controlled_access": true,
"data_use_limitation": "GRU",
"status": "released"
},
{
"@id": "/institutional-certificates/21c46421-0482-4d0d-ad82-99387fc6add6/",
"certificate_identifier": "IP113-11",
"controlled_access": true,
"data_use_limitation": "GRU",
"status": "released"
},
{
"@id": "/institutional-certificates/74917306-afc2-447b-88b2-a97e3e758518/",
"certificate_identifier": "IP113-15",
"controlled_access": true,
"data_use_limitation": "GRU",
"status": "released"
},
{
"@id": "/institutional-certificates/b117b3dd-25d9-4262-a262-630852050446/",
"certificate_identifier": "IP113-12",
"controlled_access": true,
"data_use_limitation": "GRU",
"status": "released"
},
{
"@id": "/institutional-certificates/ae438897-696e-4b7a-98a2-e72438a76b31/",
"certificate_identifier": "IP113-13",
"controlled_access": true,
"data_use_limitation": "GRU",
"status": "released"
},
{
"@id": "/institutional-certificates/4542d787-ea26-4176-b01c-5c45ca11b802/",
"certificate_identifier": "IP113-14",
"controlled_access": true,
"data_use_limitation": "GRU",
"status": "released"
},
{
"@id": "/institutional-certificates/fc5dc734-179b-45b8-bb32-e4f57a6bf59c/",
"certificate_identifier": "IP113-16",
"controlled_access": true,
"data_use_limitation": "GRU",
"status": "released"
},
{
"@id": "/institutional-certificates/ebddd6b0-c53f-4e05-a451-b5167df7cebd/",
"certificate_identifier": "IP113-18",
"controlled_access": true,
"data_use_limitation": "GRU",
"status": "released"
},
{
"@id": "/institutional-certificates/cf9e5e74-e4e6-40d4-bf04-c86fafe9d17e/",
"certificate_identifier": "IP113-17",
"controlled_access": true,
"data_use_limitation": "GRU",
"status": "released"
},
{
"@id": "/institutional-certificates/109b8309-9842-4caa-80f7-9f3d1be0c8c1/",
"certificate_identifier": "IP113-19",
"controlled_access": true,
"data_use_limitation": "GRU",
"status": "released"
},
{
"@id": "/institutional-certificates/d1431ff4-0095-49ba-a179-5fe34043afeb/",
"certificate_identifier": "IP113-20",
"controlled_access": true,
"data_use_limitation": "GRU",
"status": "released"
}
],
"lab": {
"@id": "/labs/jason-buenrostro/",
"title": "Jason Buenrostro, Broad"
},
"multiplexed_in": [],
"origin_of": [],
"part_of": "/in-vitro-systems/IGVFSM1965ZWMY/",
"parts": [],
"pooled_in": [],
"release_timestamp": "2025-04-10T21:01:23.350976+00:00",
"sample_terms": [
{
"@id": "/sample-terms/EFO_0004905/",
"status": "released",
"term_name": "induced pluripotent stem cell"
}
],
"schema_version": "26",
"sex": "unspecified",
"sorted_fractions": [],
"sources": [
{
"@id": "/sources/cirm/",
"status": "released",
"title": "California Institute for Regenerative Medicine (CIRM)"
}
],
"status": "released",
"submitted_by": {
"@id": "/users/c0838247-5022-46cf-a8fa-426e73bf4c94/",
"title": "Siddarth Wekhande"
},
"submitter_comment": "Day 7 hepatic progenitor cells",
"summary": "Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 207)",
"targeted_sample_term": {
"@id": "/sample-terms/CL_0002196/",
"status": "released",
"term_name": "hepatic oval stem cell"
},
"taxa": "Homo sapiens",
"time_post_change": 7,
"time_post_change_units": "day",
"uuid": "c928911a-58d5-4532-87a2-015612a90508",
"virtual": false
}