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GM25256 (WTC-11) — IGVFSM0098GQKH

released
Summary
GM25256 (WTC-11) differentiated cell specimen induced to liver for 18 days, male, Homo sapiens
Sample Terms
Classification
differentiated cell specimen
Sex
male
Originated From Sample
IGVFSM7732XYNQ
Age
unknown
Time Post Change
18 day
Cell Fate Change Protocol
igvf15_gersbach_hepato.pdf
Taxa
Homo sapiens
Sources
Charles Gersbach, Duke
Aliases
ansuman-satpathy:wtc11_hepato_d18_3
Protocols
Institutional Certificates

Donors

1 item
Accession
Aliases
Sex
Taxa
  • igvf:donor_of_WTC11
male
Homo sapiens

File Sets

11 items
lipid-conjugated oligo sequencing for single-nucleus ATAC-seq (10x multiome with MULTI-seq), single-nucleus RNA sequencing assay (10x multiome with MULTI-seq)
  • ansuman-satpathy:multiseq_igvf15_10x1
Ansuman Satpathy, Stanford
single-nucleus RNA sequencing assay (10x multiome with MULTI-seq)
  • ansuman-satpathy:snRNA-seq_igvf15_10x1
Ansuman Satpathy, Stanford
single-nucleus ATAC-seq (10x multiome with MULTI-seq)
  • ansuman-satpathy:snATAC-seq_igvf15_10x2
Ansuman Satpathy, Stanford
lipid-conjugated oligo sequencing for single-nucleus RNA sequencing assay (10x multiome with MULTI-seq), single-nucleus ATAC-seq (10x multiome with MULTI-seq)
  • ansuman-satpathy:multiseq_igvf15_10x2
Ansuman Satpathy, Stanford
single-nucleus RNA sequencing assay (10x multiome with MULTI-seq)
  • ansuman-satpathy:snRNA-seq_igvf15_10x2
Ansuman Satpathy, Stanford
barcodes
  • ansuman-satpathy:curated_set_barcode_map_igvf15
Ansuman Satpathy, Stanford
single-nucleus ATAC-seq (10x multiome with MULTI-seq)
  • ansuman-satpathy:snATAC-seq_igvf15_10x1
Ansuman Satpathy, Stanford
10x multiome with MULTI-seq: cell hashing barcodes, fragments, index, peaks, raw feature barcode matrix
  • ansuman-satpathy:igvf15_analysis_set
Ansuman Satpathy, Stanford
single-nucleus ATAC-seq (10x multiome with MULTI-seq)
  • ansuman-satpathy:snATAC-seq_igvf15_10x3
Ansuman Satpathy, Stanford
single-nucleus RNA sequencing assay (10x multiome with MULTI-seq)
  • ansuman-satpathy:snRNA-seq_igvf15_10x3
Ansuman Satpathy, Stanford

Multiplexed In Samples

3 items
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: GM25256 (WTC-11) differentiated cell specimen induced to liver for 18 days, male, Homo sapiens; GM25256 (WTC-11) differentiated cell specimen induced to liver for 13 days, male, Homo sapiens; ... and 10 more samples
MultiplexedSample
multiplexed sample: GM25256 (WTC-11) differentiated cell specimen induced to liver for 18 days, male, Homo sapiens; GM25256 (WTC-11) differentiated cell specimen induced to liver for 13 days, male, Homo sapiens; ... and 10 more samples
MultiplexedSample
multiplexed sample: GM25256 (WTC-11) differentiated cell specimen induced to liver for 18 days, male, Homo sapiens; GM25256 (WTC-11) differentiated cell specimen induced to liver for 13 days, male, Homo sapiens; ... and 10 more samples

Attribution

Award
HG012076
Principal Investigator(s)
Contact P.I.
Ansuman Satpathy
Lab
Ansuman Satpathy, Stanford