IGVFDS9885PKLH

released
1{
2    "@context": "/terms/",
3    "@id": "/curated-sets/IGVFDS9885PKLH/",
4    "@type": [
5        "CuratedSet",
6        "FileSet",
7        "Item"
8    ],
9    "accession": "IGVFDS9885PKLH",
10    "aliases": [
11        "igvf:igvf_catalog_mouse_variants_and_strains"
12    ],
13    "assemblies": [
14        "GRCm39"
15    ],
16    "audit": {
17        "INTERNAL_ACTION": [
18            {
19                "category": "missing publication",
20                "detail": "Curated set [IGVFDS9885PKLH](/curated-sets/IGVFDS9885PKLH/) has no `publications`. Released and archived file sets are expected to be associated with a publication.",
21                "level": 30,
22                "level_name": "INTERNAL_ACTION",
23                "name": "audit_file_set_missing_publication",
24                "path": "/curated-sets/IGVFDS9885PKLH/"
25            }
26        ]
27    },
28    "award": {
29        "@id": "/awards/Community/",
30        "title": "Community"
31    },
32    "collections": [
33        "IGVF_catalog_beta_v0.2",
34        "IGVF_catalog_beta_v0.3",
35        "IGVF_catalog_beta_v0.4"
36    ],
37    "control_for": [],
38    "creation_timestamp": "2024-11-10T20:12:42.398870+00:00",
39    "description": "mouse variants and strains",
40    "file_set_type": "external data for catalog",
41    "files": [
42        {
43            "@id": "/reference-files/IGVFFI4287QQKV/",
44            "accession": "IGVFFI4287QQKV",
45            "assembly": "GRCm39",
46            "content_type": "variants",
47            "controlled_access": false,
48            "creation_timestamp": "2024-11-10T20:38:45.205590+00:00",
49            "file_format": "vcf",
50            "file_size": 24038754279,
51            "href": "/reference-files/IGVFFI4287QQKV/@@download/IGVFFI4287QQKV.vcf.gz",
52            "s3_uri": "s3://igvf-files/2024/11/10/e8052438-de7c-4f33-a507-897040fa7b07/IGVFFI4287QQKV.vcf.gz",
53            "status": "released",
54            "submitted_file_name": "/home/ubuntu/catalogdata/mouse_variants/mgp_REL2021_snps.rsID.vcf.gz",
55            "upload_status": "validated"
56        },
57        {
58            "@id": "/reference-files/IGVFFI7837ORJB/",
59            "accession": "IGVFFI7837ORJB",
60            "assembly": "GRCm39",
61            "content_type": "variants",
62            "controlled_access": false,
63            "creation_timestamp": "2024-11-10T20:43:22.835265+00:00",
64            "file_format": "vcf",
65            "file_size": 5708299671,
66            "href": "/reference-files/IGVFFI7837ORJB/@@download/IGVFFI7837ORJB.vcf.gz",
67            "s3_uri": "s3://igvf-files/2024/11/10/d4280b1d-d141-4d91-bbb5-210e0df42f6c/IGVFFI7837ORJB.vcf.gz",
68            "status": "released",
69            "submitted_file_name": "/home/ubuntu/catalogdata/mouse_variants/mgp_REL2021_indels.rsID.vcf.gz",
70            "upload_status": "validated"
71        }
72    ],
73    "input_for": [],
74    "lab": {
75        "@id": "/labs/community/",
76        "title": "External Lab, Community"
77    },
78    "notes": "https://igvf.atlassian.net/browse/DSERV-368. This file set was moved from the Cherry lab and award to a community lab and award.",
79    "release_timestamp": "2024-11-14T07:35:46.170234+00:00",
80    "schema_version": "8",
81    "status": "released",
82    "submitted_by": {
83        "@id": "/users/6bae687f-b77a-46b9-af0e-a02c135cf42e/",
84        "title": "Meenakshi Kagda"
85    },
86    "submitted_files_timestamp": "2024-11-10T20:38:45.205590+00:00",
87    "summary": "Mus musculus GRCm39 external data for catalog",
88    "taxa": "Mus musculus",
89    "url": "https://ftp.ebi.ac.uk/pub/databases/mousegenomes/REL-2112-v8-SNPs_Indels/",
90    "uuid": "d0346fe3-38c5-4a2c-875d-3e9cd8d2b12d"
91}