IGVFDS9589CKUG

released
1{
2    "@context": "/terms/",
3    "@id": "/curated-sets/IGVFDS9589CKUG/",
4    "@type": [
5        "CuratedSet",
6        "FileSet",
7        "Item"
8    ],
9    "accession": "IGVFDS9589CKUG",
10    "aliases": [
11        "igvf:mm-chromap-genome-index-set"
12    ],
13    "assemblies": [
14        "GRCm39"
15    ],
16    "audit": {
17        "INTERNAL_ACTION": [
18            {
19                "category": "missing publication",
20                "detail": "Curated set [IGVFDS9589CKUG](/curated-sets/IGVFDS9589CKUG/) has no `publications`. Released and archived file sets are expected to be associated with a publication.",
21                "level": 30,
22                "level_name": "INTERNAL_ACTION",
23                "name": "audit_file_set_missing_publication",
24                "path": "/curated-sets/IGVFDS9589CKUG/"
25            },
26            {
27                "category": "mismatched status",
28                "detail": "Released reference file [IGVFFI5593VLWB](/reference-files/IGVFFI5593VLWB/) has in progress subobject analysis step version [2c0f1b58-aa52-4acf-ac75-2fc55da50cd5](/analysis-step-versions/2c0f1b58-aa52-4acf-ac75-2fc55da50cd5/).",
29                "level": 30,
30                "level_name": "INTERNAL_ACTION",
31                "name": "audit_item_status",
32                "path": "/reference-files/IGVFFI5593VLWB/"
33            }
34        ]
35    },
36    "award": {
37        "@id": "/awards/Community/",
38        "title": "Community"
39    },
40    "control_for": [],
41    "creation_timestamp": "2025-03-17T22:31:55.915821+00:00",
42    "description": "mouse chromap genome index",
43    "file_set_type": "genome",
44    "files": [
45        {
46            "@id": "/reference-files/IGVFFI5593VLWB/",
47            "accession": "IGVFFI5593VLWB",
48            "aliases": [
49                "igvf:ms-chromap-genome-index-file"
50            ],
51            "assembly": "GRCm39",
52            "content_type": "genome index",
53            "controlled_access": false,
54            "creation_timestamp": "2025-03-18T16:58:31.963019+00:00",
55            "file_format": "tar",
56            "file_size": 5330527769,
57            "href": "/reference-files/IGVFFI5593VLWB/@@download/IGVFFI5593VLWB.tar.gz",
58            "s3_uri": "s3://igvf-files/2025/03/18/4a4a73f9-51cf-42b0-a64e-87cd741d5e00/IGVFFI5593VLWB.tar.gz",
59            "status": "released",
60            "submitted_file_name": "gs://fc-secure-de19fd29-2253-41cd-9751-1788cf7ad1a5/submissions/intermediates/ce8961e1-5606-48bd-b443-ddce4691d8e9/generate_chromap_index/7faf12d8-63ae-4fb0-bef4-a36c143b721b/call-chromap/chromap_IGVFFI9282QLXO.tar.gz",
61            "upload_status": "validated"
62        }
63    ],
64    "input_for": [],
65    "lab": {
66        "@id": "/labs/community/",
67        "title": "External Lab, Community"
68    },
69    "release_timestamp": "2025-03-31T16:59:01.805333+00:00",
70    "schema_version": "8",
71    "status": "released",
72    "submitted_by": {
73        "@id": "/users/82c1a7c4-3cb1-4f30-9498-8430881a1c0a/",
74        "title": "Zhewei Shen"
75    },
76    "submitted_files_timestamp": "2025-03-18T16:58:31.963019+00:00",
77    "summary": "Mus musculus GRCm39 genome",
78    "taxa": "Mus musculus",
79    "uuid": "2dc016e0-c820-4459-b963-860f817d0c65"
80}