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IGVFDS8469LNLU

released
File Set Type
transcriptome
Summary
Homo sapiens GRCh38 GRCh38, mm10 GENCODE 32 GENCODE 32, GENCODE M23 GENCODE 44 transcriptome
Description
Satpathy lab transcriptome reference used in lab-internal cell ranger workflow
Taxa
Homo sapiens
Assemblies
GRCh38, GRCh38, mm10
Transcriptome Annotations
GENCODE 32, GENCODE 32, GENCODE M23, GENCODE 44
Aliases
ansuman-satpathy:transcriptome-references-cell-ranger
Attribution
Ansuman Satpathy, Stanford

Files

4 items
gtf
transcriptome reference
GRCh38, mm10 GENCODE 32, GENCODE M23 transcriptome reference
Ansuman Satpathy, Stanford
92 MB
/Users/khine/Downloads/refdata-cellranger-atac-GRCh38-and-mm10-2020-A-2.0.0-genes.gtf.gz
validated
gtf
transcriptome reference
GRCh38, mm10 GENCODE 32, GENCODE M23 transcriptome reference
Ansuman Satpathy, Stanford
75 MB
/Users/khine/Downloads/refdata-gex-GRCh38-and-mm10-2020-A-genes.gtf.gz
validated
gtf
transcriptome reference
GRCh38 GENCODE 44 transcriptome reference
Ansuman Satpathy, Stanford
62 MB
/Users/khine/Downloads/refdata-gex-GRCh38-2024-A-genes.gtf.gz
validated
gtf
transcriptome reference
GRCh38 GENCODE 32 transcriptome reference
External Lab, Community
55 MB
/Users/khine/Downloads/refdata-cellranger-arc-GRCh38-2020-mtMask-genes.gtf.gz
validated