IGVFDS5645BMIY

released
1{
2    "@context": "/terms/",
3    "@id": "/curated-sets/IGVFDS5645BMIY/",
4    "@type": [
5        "CuratedSet",
6        "FileSet",
7        "Item"
8    ],
9    "accession": "IGVFDS5645BMIY",
10    "aliases": [
11        "igvf:igvf_catalog_beta_v0.1_mouse_encode_ccre"
12    ],
13    "assemblies": [
14        "GRCm39",
15        "mm10"
16    ],
17    "audit": {
18        "INTERNAL_ACTION": [
19            {
20                "category": "missing publication",
21                "detail": "Curated set [IGVFDS5645BMIY](/curated-sets/IGVFDS5645BMIY/) has no `publications`. Released and archived file sets are expected to be associated with a publication.",
22                "level": 30,
23                "level_name": "INTERNAL_ACTION",
24                "name": "audit_file_set_missing_publication",
25                "path": "/curated-sets/IGVFDS5645BMIY/"
26            }
27        ]
28    },
29    "award": {
30        "@id": "/awards/ENCODE/",
31        "title": "ENCODE"
32    },
33    "collections": [
34        "IGVF_catalog_beta_v0.3",
35        "IGVF_catalog_beta_v0.4",
36        "ENCODE",
37        "IGVF_catalog_beta_v0.2"
38    ],
39    "control_for": [],
40    "creation_timestamp": "2024-02-24T08:57:06.617269+00:00",
41    "description": "Mouse ENCODE cCRE",
42    "file_set_type": "external data for catalog",
43    "files": [
44        {
45            "@id": "/reference-files/IGVFFI2990JTPS/",
46            "accession": "IGVFFI2990JTPS",
47            "aliases": [
48                "igvf:ENCFF167FJQ"
49            ],
50            "assembly": "mm10",
51            "content_type": "genomic_elements",
52            "controlled_access": false,
53            "creation_timestamp": "2024-02-24T09:00:10.952521+00:00",
54            "file_format": "bed",
55            "file_size": 13153330,
56            "href": "/reference-files/IGVFFI2990JTPS/@@download/IGVFFI2990JTPS.bed.gz",
57            "s3_uri": "s3://igvf-files/2024/02/24/e858567a-47a8-4905-83fd-551ac1a8d960/IGVFFI2990JTPS.bed.gz",
58            "status": "released",
59            "submitted_file_name": "ENCFF167FJQ.bed.gz",
60            "upload_status": "validation exempted"
61        },
62        {
63            "@id": "/reference-files/IGVFFI8753TTYC/",
64            "accession": "IGVFFI8753TTYC",
65            "aliases": [
66                "igvf:ENCFF167FJQ_lifted_over_GRCm39"
67            ],
68            "assembly": "GRCm39",
69            "content_type": "genomic_elements",
70            "controlled_access": false,
71            "creation_timestamp": "2024-04-02T20:48:12.685438+00:00",
72            "file_format": "bed",
73            "file_size": 13149638,
74            "href": "/reference-files/IGVFFI8753TTYC/@@download/IGVFFI8753TTYC.bed.gz",
75            "s3_uri": "s3://igvf-files/2024/04/02/c69a4e41-fd7d-485b-a37e-d6b33a20f1d7/IGVFFI8753TTYC.bed.gz",
76            "status": "released",
77            "submitted_file_name": "ENCFF167FJQ_mm39.bed.gz",
78            "upload_status": "validated"
79        }
80    ],
81    "input_for": [],
82    "lab": {
83        "@id": "/labs/encode/",
84        "title": "ENCODE Project, NHGRI"
85    },
86    "notes": "https://igvf.atlassian.net/browse/DSERV-356; https://igvf.atlassian.net/browse/WRN-481. This file set was moved from the Cherry lab and award to a community lab and award.",
87    "release_timestamp": "2024-04-05T23:04:37.145369+00:00",
88    "schema_version": "8",
89    "status": "released",
90    "submitted_by": {
91        "@id": "/users/6bae687f-b77a-46b9-af0e-a02c135cf42e/",
92        "title": "Meenakshi Kagda"
93    },
94    "submitted_files_timestamp": "2024-02-24T09:00:10.952521+00:00",
95    "summary": "Mus musculus GRCm39 mm10 external data for catalog",
96    "taxa": "Mus musculus",
97    "uuid": "eb9bad34-9bb4-4ab2-b3c6-da3ab10b6228"
98}