IGVFDS5514HTXN

released
1{
2    "@context": "/terms/",
3    "@id": "/curated-sets/IGVFDS5514HTXN/",
4    "@type": [
5        "CuratedSet",
6        "FileSet",
7        "Item"
8    ],
9    "accession": "IGVFDS5514HTXN",
10    "aliases": [
11        "igvf:igvf_catalog_beta_v0.3_distal_regulation_combined_crispr_data",
12        "igvf:ENCSR998YDI"
13    ],
14    "assemblies": [
15        "GRCh38"
16    ],
17    "audit": {
18        "INTERNAL_ACTION": [
19            {
20                "category": "missing publication",
21                "detail": "Curated set [IGVFDS5514HTXN](/curated-sets/IGVFDS5514HTXN/) has no `publications`. Released and archived file sets are expected to be associated with a publication.",
22                "level": 30,
23                "level_name": "INTERNAL_ACTION",
24                "name": "audit_file_set_missing_publication",
25                "path": "/curated-sets/IGVFDS5514HTXN/"
26            }
27        ]
28    },
29    "award": {
30        "@id": "/awards/ENCODE/",
31        "title": "ENCODE"
32    },
33    "collections": [
34        "IGVF_catalog_beta_v0.3",
35        "IGVF_catalog_beta_v0.4",
36        "ENCODE"
37    ],
38    "control_for": [],
39    "creation_timestamp": "2024-07-12T06:42:38.134623+00:00",
40    "description": "Combined CRISPR dataset created from harmonizing data from Nasser et al., 2021, Gasperini et al., 2019 and Schraivogel et al., 2020",
41    "file_set_type": "external data for catalog",
42    "files": [
43        {
44            "@id": "/reference-files/IGVFFI2331IRGH/",
45            "accession": "IGVFFI2331IRGH",
46            "aliases": [
47                "igvf:ENCFF968BZL"
48            ],
49            "assembly": "GRCh38",
50            "content_type": "genomic_elements_genes",
51            "controlled_access": false,
52            "creation_timestamp": "2024-07-12T06:47:53.987722+00:00",
53            "file_format": "tsv",
54            "file_size": 692575,
55            "href": "/reference-files/IGVFFI2331IRGH/@@download/IGVFFI2331IRGH.tsv.gz",
56            "s3_uri": "s3://igvf-files/2024/07/12/3f89b948-ed80-486d-98ad-702073055b37/IGVFFI2331IRGH.tsv.gz",
57            "status": "released",
58            "submitted_file_name": "ENCFF968BZL.tsv.gz",
59            "upload_status": "validation exempted"
60        }
61    ],
62    "input_for": [],
63    "lab": {
64        "@id": "/labs/encode/",
65        "title": "ENCODE Project, NHGRI"
66    },
67    "notes": "https://igvf.atlassian.net/browse/DSERV-412, https://igvf.atlassian.net/browse/WRN-537. This file set was moved from the Cherry lab and award to a community lab and award.",
68    "release_timestamp": "2024-07-18T23:37:41.636354+00:00",
69    "schema_version": "8",
70    "status": "released",
71    "submitted_by": {
72        "@id": "/users/6bae687f-b77a-46b9-af0e-a02c135cf42e/",
73        "title": "Meenakshi Kagda"
74    },
75    "submitted_files_timestamp": "2024-07-12T06:47:53.987722+00:00",
76    "summary": "Homo sapiens GRCh38 external data for catalog",
77    "taxa": "Homo sapiens",
78    "url": "https://www.encodeproject.org/annotations/ENCSR998YDI/",
79    "uuid": "13e10485-bcf6-41b6-ad6a-09261a17af84"
80}