IGVFDS5514HTXN

{
    "@context": "/terms/",
    "@id": "/curated-sets/IGVFDS5514HTXN/",
    "@type": [
        "CuratedSet",
        "FileSet",
        "Item"
    ],
    "accession": "IGVFDS5514HTXN",
    "aliases": [
        "igvf:igvf_catalog_beta_v0.3_distal_regulation_combined_crispr_data",
        "igvf:ENCSR998YDI"
    ],
    "assemblies": [
        "GRCh38"
    ],
    "audit": {
        "WARNING": [
            {
                "category": "missing dbxrefs",
                "detail": "Reference file [IGVFFI2331IRGH](/reference-files/IGVFFI2331IRGH/) is an external file, but does not have identifier(s) from an external resource listed in `dbxrefs`. Reference files uploaded from external resources are expected to have external identifiers in dbxrefs.",
                "level": 40,
                "level_name": "WARNING",
                "name": "audit_external_reference_files",
                "path": "/reference-files/IGVFFI2331IRGH/"
            },
            {
                "category": "upload status not validated",
                "detail": "Reference file [IGVFFI2331IRGH](/reference-files/IGVFFI2331IRGH/) has `upload_status` invalidated. Validation error detail: {\"tabular_file_error\": [[939, 20, \"type-error\", \"type is \\\"number/default\\\"\"], [1516, 21, \"type-error\", \"type is \\\"number/default\\\"\"], [1518, 21, \"type-error\", \"type is \\\"number/default\\\"\"], [1519, 21, \"type-error\", \"type is \\\"number/default\\\"\"], [1528, 21, \"type-error\", \"type is \\\"number/default\\\"\"], [1531, 21, \"type-error\", \"type is \\\"number/default\\\"\"], [1948, 21, \"type-error\", \"type is \\\"number/default\\\"\"], [1949, 21, \"type-error\", \"type is \\\"number/default\\\"\"], [2818, 21, \"type-error\", \"type is \\\"number/default\\\"\"], [3378, 20, \"type-error\", \"type is \\\"number/default\\\"\"]]}. External files are expected to be validated.",
                "level": 40,
                "level_name": "WARNING",
                "name": "audit_upload_status",
                "path": "/reference-files/IGVFFI2331IRGH/"
            }
        ]
    },
    "award": {
        "@id": "/awards/ENCODE/",
        "title": "ENCODE"
    },
    "collections": [
        "IGVF_catalog_beta_v0.3",
        "ENCODE"
    ],
    "control_for": [],
    "creation_timestamp": "2024-07-12T06:42:38.134623+00:00",
    "description": "Combined CRISPR dataset created from harmonizing data from Nasser et al., 2021, Gasperini et al., 2019 and Schraivogel et al., 2020",
    "file_set_type": "external data for catalog",
    "files": [
        {
            "@id": "/reference-files/IGVFFI2331IRGH/",
            "accession": "IGVFFI2331IRGH",
            "aliases": [
                "igvf:ENCFF968BZL"
            ],
            "assembly": "GRCh38",
            "content_type": "regulatory_regions_genes",
            "creation_timestamp": "2024-07-12T06:47:53.987722+00:00",
            "file_format": "tsv",
            "file_size": 692575,
            "href": "/reference-files/IGVFFI2331IRGH/@@download/IGVFFI2331IRGH.tsv.gz",
            "s3_uri": "s3://igvf-files/2024/07/12/3f89b948-ed80-486d-98ad-702073055b37/IGVFFI2331IRGH.tsv.gz",
            "submitted_file_name": "ENCFF968BZL.tsv.gz",
            "upload_status": "invalidated"
        }
    ],
    "input_for": [],
    "lab": {
        "@id": "/labs/encode/",
        "title": "ENCODE Project, NHGRI"
    },
    "notes": "https://igvf.atlassian.net/browse/DSERV-412, https://igvf.atlassian.net/browse/WRN-537. This file set was moved from the Cherry lab and award to a community lab and award.",
    "release_timestamp": "2024-07-18T23:37:41.636354+00:00",
    "schema_version": "8",
    "status": "released",
    "submitted_by": {
        "@id": "/users/6bae687f-b77a-46b9-af0e-a02c135cf42e/",
        "title": "Meenakshi Kagda"
    },
    "submitted_files_timestamp": "2024-07-12T06:47:53.987722+00:00",
    "summary": "Homo sapiens GRCh38 external data for catalog",
    "taxa": "Homo sapiens",
    "url": "https://www.encodeproject.org/annotations/ENCSR998YDI/",
    "uuid": "13e10485-bcf6-41b6-ad6a-09261a17af84"
}