IGVFDS5400MDLF

{
    "@context": "/terms/",
    "@id": "/curated-sets/IGVFDS5400MDLF/",
    "@type": [
        "CuratedSet",
        "FileSet",
        "Item"
    ],
    "accession": "IGVFDS5400MDLF",
    "aliases": [
        "jesse-engreitz:guidedeisgn_CRUDO_CCND1"
    ],
    "assemblies": [
        "GRCh38"
    ],
    "audit": {
        "NOT_COMPLIANT": [
            {
                "category": "missing file format specifications",
                "detail": "Tabular file [IGVFFI5924HOIN](/tabular-files/IGVFFI5924HOIN/) has no `file_format_specifications`. Tabular files are expected to link to a file format specifications document describing the headers of the file.",
                "level": 50,
                "level_name": "NOT_COMPLIANT",
                "name": "audit_tabular_file_no_file_format_specifications",
                "path": "/tabular-files/IGVFFI5924HOIN/"
            },
            {
                "category": "missing file format specifications",
                "detail": "Tabular file [IGVFFI6046CCXW](/tabular-files/IGVFFI6046CCXW/) has no `file_format_specifications`. Tabular files are expected to link to a file format specifications document describing the headers of the file.",
                "level": 50,
                "level_name": "NOT_COMPLIANT",
                "name": "audit_tabular_file_no_file_format_specifications",
                "path": "/tabular-files/IGVFFI6046CCXW/"
            }
        ]
    },
    "award": {
        "@id": "/awards/HG011972/",
        "component": "functional characterization",
        "contact_pi": {
            "@id": "/users/6c75dbfa-635e-4a7a-8ec8-9e51e9c380a4/",
            "title": "Jesse Engreitz"
        },
        "title": "Stanford Center for Connecting DNA Variants to Function and Phenotype"
    },
    "control_for": [],
    "creation_timestamp": "2024-05-16T20:52:15.245307+00:00",
    "file_set_type": "guide RNAs",
    "files": [
        {
            "@id": "/tabular-files/IGVFFI5924HOIN/",
            "accession": "IGVFFI5924HOIN",
            "aliases": [
                "jesse-engreitz:guidedesign_file_CRUDO_CCND1"
            ],
            "content_type": "guide RNA sequences",
            "creation_timestamp": "2024-05-31T04:27:56.153365+00:00",
            "file_format": "tsv",
            "file_size": 66112,
            "href": "/tabular-files/IGVFFI5924HOIN/@@download/IGVFFI5924HOIN.tsv.gz",
            "s3_uri": "s3://igvf-files/2024/05/31/487f5189-2a8c-4dac-b72c-7c233a118e5b/IGVFFI5924HOIN.tsv.gz",
            "submitted_file_name": "/oak/stanford/groups/engreitz/Projects/Cohesin/240410_IGVF_upload/gRNA_design_files/210213_CohesinFlowFISH_CCND1.design.liftOver.txt.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/tabular-files/IGVFFI6046CCXW/",
            "accession": "IGVFFI6046CCXW",
            "aliases": [
                "jesse-engreitz:locus_file_CRUDO_CCND1"
            ],
            "assembly": "GRCh38",
            "content_type": "elements reference",
            "creation_timestamp": "2024-05-31T21:02:41.929558+00:00",
            "file_format": "tsv",
            "file_size": 1338,
            "href": "/tabular-files/IGVFFI6046CCXW/@@download/IGVFFI6046CCXW.tsv.gz",
            "s3_uri": "s3://igvf-files/2024/05/31/855de124-b443-4b63-abd0-b44bbbbefb0c/IGVFFI6046CCXW.tsv.gz",
            "submitted_file_name": "/oak/stanford/groups/engreitz/Projects/Cohesin/240410_IGVF_upload/CCND1.large_scale_loci_list.bed.gz",
            "upload_status": "validated"
        }
    ],
    "input_for": [],
    "lab": {
        "@id": "/labs/jesse-engreitz/",
        "title": "Jesse Engreitz, Stanford"
    },
    "release_timestamp": "2024-07-10T21:20:01.419446+00:00",
    "schema_version": "8",
    "status": "released",
    "submitted_by": {
        "@id": "/users/3bd6f74c-8cf3-4c35-a94d-0c7c11654815/",
        "title": "Chongyon Park"
    },
    "submitted_files_timestamp": "2024-05-31T04:27:56.153365+00:00",
    "summary": "Homo sapiens GRCh38 guide RNAs",
    "taxa": "Homo sapiens",
    "uuid": "85540687-9a8b-449b-8f8d-f35aa867e2de"
}