IGVFDS5269JTLD

{
    "@context": "/terms/",
    "@id": "/curated-sets/IGVFDS5269JTLD/",
    "@type": [
        "CuratedSet",
        "FileSet",
        "Item"
    ],
    "accession": "IGVFDS5269JTLD",
    "assemblies": [
        "GRCm39"
    ],
    "audit": {
        "WARNING": [
            {
                "category": "missing dbxrefs",
                "detail": "Reference file [IGVFFI9282QLXO](/reference-files/IGVFFI9282QLXO/) is an external file, but does not have identifier(s) from an external resource listed in `dbxrefs`. Reference files uploaded from external resources are expected to have external identifiers in dbxrefs.",
                "level": 40,
                "level_name": "WARNING",
                "name": "audit_external_reference_files",
                "path": "/reference-files/IGVFFI9282QLXO/"
            }
        ]
    },
    "award": {
        "@id": "/awards/Community/",
        "title": "Community"
    },
    "control_for": [],
    "creation_timestamp": "2023-03-02T21:04:30.877830+00:00",
    "description": "Mus musculus genome reference files",
    "file_set_type": "genome",
    "files": [
        {
            "@id": "/reference-files/IGVFFI9282QLXO/",
            "accession": "IGVFFI9282QLXO",
            "assembly": "GRCm39",
            "content_type": "genome reference",
            "controlled_access": false,
            "creation_timestamp": "2023-05-26T17:27:01.537449+00:00",
            "file_format": "fasta",
            "file_size": 870543764,
            "href": "/reference-files/IGVFFI9282QLXO/@@download/IGVFFI9282QLXO.fasta.gz",
            "s3_uri": "s3://igvf-files/2023/05/26/825e1ca0-ae66-4755-8071-4fb7704c1f45/IGVFFI9282QLXO.fasta.gz",
            "status": "released",
            "submitted_file_name": "GRCm39.genome.fa.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/reference-files/IGVFFI9744VSJF/",
            "accession": "IGVFFI9744VSJF",
            "assembly": "GRCm39",
            "content_type": "transcriptome reference",
            "controlled_access": false,
            "creation_timestamp": "2023-05-26T17:41:48.089912+00:00",
            "file_format": "gtf",
            "file_size": 29308465,
            "href": "/reference-files/IGVFFI9744VSJF/@@download/IGVFFI9744VSJF.gtf.gz",
            "s3_uri": "s3://igvf-files/2023/05/26/285b1ced-b659-42e8-bef5-d150c79cc002/IGVFFI9744VSJF.gtf.gz",
            "status": "released",
            "submitted_file_name": "gencode.vM32.chr_patch_hapl_scaff.annotation.gtf.gz",
            "transcriptome_annotation": "GENCODE M32",
            "upload_status": "validated"
        },
        {
            "@id": "/reference-files/IGVFFI2412FAXG/",
            "accession": "IGVFFI2412FAXG",
            "assembly": "GRCm39",
            "content_type": "transcriptome reference",
            "controlled_access": false,
            "creation_timestamp": "2024-11-23T13:45:49.776112+00:00",
            "file_format": "gtf",
            "file_size": 29306356,
            "href": "/reference-files/IGVFFI2412FAXG/@@download/IGVFFI2412FAXG.gtf.gz",
            "s3_uri": "s3://igvf-files/2024/11/23/4ee29256-c34a-4e81-a85d-55633a1c43ea/IGVFFI2412FAXG.gtf.gz",
            "status": "released",
            "submitted_file_name": "gencode.vM33.chr_patch_hapl_scaff.annotation.gtf.gz",
            "transcriptome_annotation": "GENCODE M33",
            "upload_status": "validated"
        }
    ],
    "input_for": [],
    "lab": {
        "@id": "/labs/community/",
        "title": "External Lab, Community"
    },
    "notes": "This file set was moved from the Cherry lab and award to a community lab and award.",
    "release_timestamp": "2023-06-15T16:46:10.132873+00:00",
    "schema_version": "8",
    "status": "released",
    "submitted_by": {
        "@id": "/users/98fb23d3-0d79-4c3d-981d-01539e6589f1/",
        "title": "Idan Gabdank"
    },
    "submitted_files_timestamp": "2023-05-26T17:27:01.537449+00:00",
    "summary": "Mus musculus GRCm39 GENCODE M32 GENCODE M33 genome",
    "taxa": "Mus musculus",
    "transcriptome_annotations": [
        "GENCODE M32",
        "GENCODE M33"
    ],
    "uuid": "27e33970-0cc8-46c4-aa19-0e31573bf3f5"
}