IGVFDS5125PDRQ

{
    "@context": "/terms/",
    "@id": "/curated-sets/IGVFDS5125PDRQ/",
    "@type": [
        "CuratedSet",
        "FileSet",
        "Item"
    ],
    "accession": "IGVFDS5125PDRQ",
    "aliases": [
        "jesse-engreitz:guidedeisgn_CRUDO_FAM3C"
    ],
    "assemblies": [
        "GRCh38"
    ],
    "audit": {
        "NOT_COMPLIANT": [
            {
                "category": "missing file format specifications",
                "detail": "Tabular file [IGVFFI0842RREU](/tabular-files/IGVFFI0842RREU/) has no `file_format_specifications`. Tabular files are expected to link to a file format specifications document describing the headers of the file.",
                "level": 50,
                "level_name": "NOT_COMPLIANT",
                "name": "audit_tabular_file_no_file_format_specifications",
                "path": "/tabular-files/IGVFFI0842RREU/"
            },
            {
                "category": "missing file format specifications",
                "detail": "Tabular file [IGVFFI4071JDLX](/tabular-files/IGVFFI4071JDLX/) has no `file_format_specifications`. Tabular files are expected to link to a file format specifications document describing the headers of the file.",
                "level": 50,
                "level_name": "NOT_COMPLIANT",
                "name": "audit_tabular_file_no_file_format_specifications",
                "path": "/tabular-files/IGVFFI4071JDLX/"
            }
        ]
    },
    "award": {
        "@id": "/awards/HG011972/",
        "component": "functional characterization",
        "contact_pi": {
            "@id": "/users/6c75dbfa-635e-4a7a-8ec8-9e51e9c380a4/",
            "title": "Jesse Engreitz"
        },
        "title": "Stanford Center for Connecting DNA Variants to Function and Phenotype"
    },
    "control_for": [],
    "creation_timestamp": "2024-05-16T20:54:27.511520+00:00",
    "file_set_type": "guide RNAs",
    "files": [
        {
            "@id": "/tabular-files/IGVFFI0842RREU/",
            "accession": "IGVFFI0842RREU",
            "aliases": [
                "jesse-engreitz:guidedesign_file_CRUDO_FAM3C"
            ],
            "content_type": "guide RNA sequences",
            "creation_timestamp": "2024-05-31T04:27:53.478551+00:00",
            "file_format": "tsv",
            "file_size": 35067,
            "href": "/tabular-files/IGVFFI0842RREU/@@download/IGVFFI0842RREU.tsv.gz",
            "s3_uri": "s3://igvf-files/2024/05/31/5cafc423-df48-473f-ab93-6fc5647d8974/IGVFFI0842RREU.tsv.gz",
            "submitted_file_name": "/oak/stanford/groups/engreitz/Projects/Cohesin/240410_IGVF_upload/gRNA_design_files/210213_CohesinFlowFISH_FAM3C.design.liftOver.txt.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/tabular-files/IGVFFI4071JDLX/",
            "accession": "IGVFFI4071JDLX",
            "aliases": [
                "jesse-engreitz:locus_file_CRUDO_FAM3C"
            ],
            "content_type": "elements reference",
            "creation_timestamp": "2024-05-31T21:02:38.988504+00:00",
            "file_format": "tsv",
            "file_size": 877,
            "href": "/tabular-files/IGVFFI4071JDLX/@@download/IGVFFI4071JDLX.tsv.gz",
            "s3_uri": "s3://igvf-files/2024/05/31/8489a47c-8bee-4a4c-8eb0-06f32a41a003/IGVFFI4071JDLX.tsv.gz",
            "submitted_file_name": "/oak/stanford/groups/engreitz/Projects/Cohesin/240410_IGVF_upload/FAM3C.large_scale_loci_list.bed.gz",
            "upload_status": "validated"
        }
    ],
    "input_file_set_for": [],
    "lab": {
        "@id": "/labs/jesse-engreitz/",
        "title": "Jesse Engreitz, Stanford"
    },
    "release_timestamp": "2024-07-10T21:20:04.798993+00:00",
    "schema_version": "8",
    "status": "released",
    "submitted_by": {
        "@id": "/users/3bd6f74c-8cf3-4c35-a94d-0c7c11654815/",
        "title": "Chongyon Park"
    },
    "submitted_files_timestamp": "2024-05-31T04:27:53.478551+00:00",
    "summary": "Homo sapiens GRCh38 guide RNAs",
    "taxa": "Homo sapiens",
    "uuid": "1e3d6b10-cdc5-4c8f-abf5-2eecc7379154"
}