IGVFDS3201UTPN

{
    "@context": "/terms/",
    "@id": "/curated-sets/IGVFDS3201UTPN/",
    "@type": [
        "CuratedSet",
        "FileSet",
        "Item"
    ],
    "accession": "IGVFDS3201UTPN",
    "aliases": [
        "jesse-engreitz:curated_set_eRZ10_teloHAEC_TLNRD1_enhancer_CRISPRi_FlowFISH_design"
    ],
    "assemblies": [
        "GRCh38"
    ],
    "audit": {
        "NOT_COMPLIANT": [
            {
                "category": "missing file format specifications",
                "detail": "Tabular file [IGVFFI9333CGMN](/tabular-files/IGVFFI9333CGMN/) has no `file_format_specifications`. Tabular files are expected to link to a file format specifications document describing the headers of the file.",
                "level": 50,
                "level_name": "NOT_COMPLIANT",
                "name": "audit_tabular_file_no_file_format_specifications",
                "path": "/tabular-files/IGVFFI9333CGMN/"
            }
        ]
    },
    "award": {
        "@id": "/awards/HG011972/",
        "component": "functional characterization",
        "contact_pi": {
            "@id": "/users/6c75dbfa-635e-4a7a-8ec8-9e51e9c380a4/",
            "title": "Jesse Engreitz"
        },
        "title": "Stanford Center for Connecting DNA Variants to Function and Phenotype"
    },
    "control_for": [],
    "creation_timestamp": "2024-01-25T22:30:15.394463+00:00",
    "description": "gRNAs were designed to target DNase peak in TeloHAEC in chr15:80,975,273-81,134,905 to determine regulatory elements of TLNRD1",
    "file_set_type": "guide RNAs",
    "files": [
        {
            "@id": "/tabular-files/IGVFFI9333CGMN/",
            "accession": "IGVFFI9333CGMN",
            "aliases": [
                "jesse-engreitz:tabular_file_eRZ10_teloHAEC_TLNRD1_enhancer_CRISPRi_FlowFISH_gRNA_sequences_GRCh38"
            ],
            "assembly": "GRCh38",
            "content_type": "guide RNA sequences",
            "controlled_access": false,
            "creation_timestamp": "2024-01-25T23:04:04.183491+00:00",
            "file_format": "bed",
            "file_size": 3902,
            "href": "/tabular-files/IGVFFI9333CGMN/@@download/IGVFFI9333CGMN.bed.gz",
            "s3_uri": "s3://igvf-files/2024/01/25/7f8384bb-9a62-49cb-bb31-9a8e40551ee5/IGVFFI9333CGMN.bed.gz",
            "status": "released",
            "submitted_file_name": "/Users/ronghao/Desktop/Research/data/eRZ10_FlowFISH/TLNRD1/design/20220126_TeloHAEC_CRISPRi_TLNRD1_GRCh38.design.bed.gz",
            "upload_status": "validated"
        }
    ],
    "input_for": [],
    "lab": {
        "@id": "/labs/jesse-engreitz/",
        "title": "Jesse Engreitz, Stanford"
    },
    "release_timestamp": "2024-02-07T19:02:42.254830+00:00",
    "schema_version": "8",
    "status": "released",
    "submitted_by": {
        "@id": "/users/4b2083b4-24c1-41d8-9daa-e79299f00d6e/",
        "title": "Ronghao Zhou"
    },
    "submitted_files_timestamp": "2023-12-05T01:12:59.697894+00:00",
    "summary": "GRCh38 guide RNAs",
    "uuid": "710c92a4-7dfd-458d-be82-3f14d645617b"
}