{
"@context": "/terms/",
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"CuratedSet",
"FileSet",
"Item"
],
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"aliases": [
"igvf:igvf_catalog_beta_v0.1_caqtls"
],
"assemblies": [
"GRCh38"
],
"audit": {
"WARNING": [
{
"category": "missing dbxrefs",
"detail": "Reference file [IGVFFI0023NZRR](/reference-files/IGVFFI0023NZRR/) is an external file, but does not have identifier(s) from an external resource listed in `dbxrefs`. Reference files uploaded from external resources are expected to have external identifiers in dbxrefs.",
"level": 40,
"level_name": "WARNING",
"name": "audit_external_reference_files",
"path": "/reference-files/IGVFFI0023NZRR/"
},
{
"category": "missing dbxrefs",
"detail": "Reference file [IGVFFI7251ORJT](/reference-files/IGVFFI7251ORJT/) is an external file, but does not have identifier(s) from an external resource listed in `dbxrefs`. Reference files uploaded from external resources are expected to have external identifiers in dbxrefs.",
"level": 40,
"level_name": "WARNING",
"name": "audit_external_reference_files",
"path": "/reference-files/IGVFFI7251ORJT/"
},
{
"category": "missing dbxrefs",
"detail": "Reference file [IGVFFI1013OWCN](/reference-files/IGVFFI1013OWCN/) is an external file, but does not have identifier(s) from an external resource listed in `dbxrefs`. Reference files uploaded from external resources are expected to have external identifiers in dbxrefs.",
"level": 40,
"level_name": "WARNING",
"name": "audit_external_reference_files",
"path": "/reference-files/IGVFFI1013OWCN/"
},
{
"category": "missing dbxrefs",
"detail": "Reference file [IGVFFI3392RQSD](/reference-files/IGVFFI3392RQSD/) is an external file, but does not have identifier(s) from an external resource listed in `dbxrefs`. Reference files uploaded from external resources are expected to have external identifiers in dbxrefs.",
"level": 40,
"level_name": "WARNING",
"name": "audit_external_reference_files",
"path": "/reference-files/IGVFFI3392RQSD/"
},
{
"category": "missing dbxrefs",
"detail": "Reference file [IGVFFI2684SLSC](/reference-files/IGVFFI2684SLSC/) is an external file, but does not have identifier(s) from an external resource listed in `dbxrefs`. Reference files uploaded from external resources are expected to have external identifiers in dbxrefs.",
"level": 40,
"level_name": "WARNING",
"name": "audit_external_reference_files",
"path": "/reference-files/IGVFFI2684SLSC/"
},
{
"category": "missing dbxrefs",
"detail": "Reference file [IGVFFI1992KAYX](/reference-files/IGVFFI1992KAYX/) is an external file, but does not have identifier(s) from an external resource listed in `dbxrefs`. Reference files uploaded from external resources are expected to have external identifiers in dbxrefs.",
"level": 40,
"level_name": "WARNING",
"name": "audit_external_reference_files",
"path": "/reference-files/IGVFFI1992KAYX/"
},
{
"category": "missing dbxrefs",
"detail": "Reference file [IGVFFI2118QQHH](/reference-files/IGVFFI2118QQHH/) is an external file, but does not have identifier(s) from an external resource listed in `dbxrefs`. Reference files uploaded from external resources are expected to have external identifiers in dbxrefs.",
"level": 40,
"level_name": "WARNING",
"name": "audit_external_reference_files",
"path": "/reference-files/IGVFFI2118QQHH/"
},
{
"category": "missing dbxrefs",
"detail": "Reference file [IGVFFI0876BTBI](/reference-files/IGVFFI0876BTBI/) is an external file, but does not have identifier(s) from an external resource listed in `dbxrefs`. Reference files uploaded from external resources are expected to have external identifiers in dbxrefs.",
"level": 40,
"level_name": "WARNING",
"name": "audit_external_reference_files",
"path": "/reference-files/IGVFFI0876BTBI/"
},
{
"category": "missing dbxrefs",
"detail": "Reference file [IGVFFI7770JDBK](/reference-files/IGVFFI7770JDBK/) is an external file, but does not have identifier(s) from an external resource listed in `dbxrefs`. Reference files uploaded from external resources are expected to have external identifiers in dbxrefs.",
"level": 40,
"level_name": "WARNING",
"name": "audit_external_reference_files",
"path": "/reference-files/IGVFFI7770JDBK/"
},
{
"category": "missing dbxrefs",
"detail": "Reference file [IGVFFI0637ZUVZ](/reference-files/IGVFFI0637ZUVZ/) is an external file, but does not have identifier(s) from an external resource listed in `dbxrefs`. Reference files uploaded from external resources are expected to have external identifiers in dbxrefs.",
"level": 40,
"level_name": "WARNING",
"name": "audit_external_reference_files",
"path": "/reference-files/IGVFFI0637ZUVZ/"
},
{
"category": "missing dbxrefs",
"detail": "Reference file [IGVFFI2060WNVB](/reference-files/IGVFFI2060WNVB/) is an external file, but does not have identifier(s) from an external resource listed in `dbxrefs`. Reference files uploaded from external resources are expected to have external identifiers in dbxrefs.",
"level": 40,
"level_name": "WARNING",
"name": "audit_external_reference_files",
"path": "/reference-files/IGVFFI2060WNVB/"
},
{
"category": "missing dbxrefs",
"detail": "Reference file [IGVFFI0123ZPTO](/reference-files/IGVFFI0123ZPTO/) is an external file, but does not have identifier(s) from an external resource listed in `dbxrefs`. Reference files uploaded from external resources are expected to have external identifiers in dbxrefs.",
"level": 40,
"level_name": "WARNING",
"name": "audit_external_reference_files",
"path": "/reference-files/IGVFFI0123ZPTO/"
},
{
"category": "missing dbxrefs",
"detail": "Reference file [IGVFFI9155YFIJ](/reference-files/IGVFFI9155YFIJ/) is an external file, but does not have identifier(s) from an external resource listed in `dbxrefs`. Reference files uploaded from external resources are expected to have external identifiers in dbxrefs.",
"level": 40,
"level_name": "WARNING",
"name": "audit_external_reference_files",
"path": "/reference-files/IGVFFI9155YFIJ/"
},
{
"category": "missing dbxrefs",
"detail": "Reference file [IGVFFI3609TLOA](/reference-files/IGVFFI3609TLOA/) is an external file, but does not have identifier(s) from an external resource listed in `dbxrefs`. Reference files uploaded from external resources are expected to have external identifiers in dbxrefs.",
"level": 40,
"level_name": "WARNING",
"name": "audit_external_reference_files",
"path": "/reference-files/IGVFFI3609TLOA/"
},
{
"category": "missing dbxrefs",
"detail": "Reference file [IGVFFI1454UUGM](/reference-files/IGVFFI1454UUGM/) is an external file, but does not have identifier(s) from an external resource listed in `dbxrefs`. Reference files uploaded from external resources are expected to have external identifiers in dbxrefs.",
"level": 40,
"level_name": "WARNING",
"name": "audit_external_reference_files",
"path": "/reference-files/IGVFFI1454UUGM/"
},
{
"category": "missing dbxrefs",
"detail": "Reference file [IGVFFI9673DOVK](/reference-files/IGVFFI9673DOVK/) is an external file, but does not have identifier(s) from an external resource listed in `dbxrefs`. Reference files uploaded from external resources are expected to have external identifiers in dbxrefs.",
"level": 40,
"level_name": "WARNING",
"name": "audit_external_reference_files",
"path": "/reference-files/IGVFFI9673DOVK/"
},
{
"category": "missing dbxrefs",
"detail": "Reference file [IGVFFI7324DELB](/reference-files/IGVFFI7324DELB/) is an external file, but does not have identifier(s) from an external resource listed in `dbxrefs`. Reference files uploaded from external resources are expected to have external identifiers in dbxrefs.",
"level": 40,
"level_name": "WARNING",
"name": "audit_external_reference_files",
"path": "/reference-files/IGVFFI7324DELB/"
},
{
"category": "missing dbxrefs",
"detail": "Reference file [IGVFFI6804IKUZ](/reference-files/IGVFFI6804IKUZ/) is an external file, but does not have identifier(s) from an external resource listed in `dbxrefs`. Reference files uploaded from external resources are expected to have external identifiers in dbxrefs.",
"level": 40,
"level_name": "WARNING",
"name": "audit_external_reference_files",
"path": "/reference-files/IGVFFI6804IKUZ/"
},
{
"category": "missing dbxrefs",
"detail": "Reference file [IGVFFI2505DVUA](/reference-files/IGVFFI2505DVUA/) is an external file, but does not have identifier(s) from an external resource listed in `dbxrefs`. Reference files uploaded from external resources are expected to have external identifiers in dbxrefs.",
"level": 40,
"level_name": "WARNING",
"name": "audit_external_reference_files",
"path": "/reference-files/IGVFFI2505DVUA/"
},
{
"category": "missing dbxrefs",
"detail": "Reference file [IGVFFI1245XCRR](/reference-files/IGVFFI1245XCRR/) is an external file, but does not have identifier(s) from an external resource listed in `dbxrefs`. Reference files uploaded from external resources are expected to have external identifiers in dbxrefs.",
"level": 40,
"level_name": "WARNING",
"name": "audit_external_reference_files",
"path": "/reference-files/IGVFFI1245XCRR/"
},
{
"category": "missing dbxrefs",
"detail": "Reference file [IGVFFI2916XTBD](/reference-files/IGVFFI2916XTBD/) is an external file, but does not have identifier(s) from an external resource listed in `dbxrefs`. Reference files uploaded from external resources are expected to have external identifiers in dbxrefs.",
"level": 40,
"level_name": "WARNING",
"name": "audit_external_reference_files",
"path": "/reference-files/IGVFFI2916XTBD/"
},
{
"category": "missing dbxrefs",
"detail": "Reference file [IGVFFI4973IJAM](/reference-files/IGVFFI4973IJAM/) is an external file, but does not have identifier(s) from an external resource listed in `dbxrefs`. Reference files uploaded from external resources are expected to have external identifiers in dbxrefs.",
"level": 40,
"level_name": "WARNING",
"name": "audit_external_reference_files",
"path": "/reference-files/IGVFFI4973IJAM/"
},
{
"category": "missing dbxrefs",
"detail": "Reference file [IGVFFI4945EHCA](/reference-files/IGVFFI4945EHCA/) is an external file, but does not have identifier(s) from an external resource listed in `dbxrefs`. Reference files uploaded from external resources are expected to have external identifiers in dbxrefs.",
"level": 40,
"level_name": "WARNING",
"name": "audit_external_reference_files",
"path": "/reference-files/IGVFFI4945EHCA/"
},
{
"category": "missing dbxrefs",
"detail": "Reference file [IGVFFI5367FBUQ](/reference-files/IGVFFI5367FBUQ/) is an external file, but does not have identifier(s) from an external resource listed in `dbxrefs`. Reference files uploaded from external resources are expected to have external identifiers in dbxrefs.",
"level": 40,
"level_name": "WARNING",
"name": "audit_external_reference_files",
"path": "/reference-files/IGVFFI5367FBUQ/"
},
{
"category": "missing dbxrefs",
"detail": "Reference file [IGVFFI2401WTHI](/reference-files/IGVFFI2401WTHI/) is an external file, but does not have identifier(s) from an external resource listed in `dbxrefs`. Reference files uploaded from external resources are expected to have external identifiers in dbxrefs.",
"level": 40,
"level_name": "WARNING",
"name": "audit_external_reference_files",
"path": "/reference-files/IGVFFI2401WTHI/"
},
{
"category": "missing dbxrefs",
"detail": "Reference file [IGVFFI2543SBQC](/reference-files/IGVFFI2543SBQC/) is an external file, but does not have identifier(s) from an external resource listed in `dbxrefs`. Reference files uploaded from external resources are expected to have external identifiers in dbxrefs.",
"level": 40,
"level_name": "WARNING",
"name": "audit_external_reference_files",
"path": "/reference-files/IGVFFI2543SBQC/"
}
]
},
"award": {
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"title": "ENCODE"
},
"collections": [
"IGVF_catalog_beta_v0.1",
"IGVF_catalog_beta_v0.3",
"IGVF_catalog_beta_v0.2",
"ENCODE"
],
"control_for": [],
"creation_timestamp": "2023-11-08T08:19:56.668909+00:00",
"description": "caQTLs",
"file_set_type": "external data for catalog",
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{
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"accession": "IGVFFI2401WTHI",
"aliases": [
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],
"assembly": "GRCh38",
"content_type": "variants_regulatory_regions",
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"href": "/reference-files/IGVFFI2401WTHI/@@download/IGVFFI2401WTHI.bed.gz",
"s3_uri": "s3://igvf-files/2023/11/30/6cc33099-d1fd-464e-8a16-7c5f4dc60880/IGVFFI2401WTHI.bed.gz",
"submitted_file_name": "ENCFF004ISX.bed.gz",
"upload_status": "validated"
},
{
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"accession": "IGVFFI3392RQSD",
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],
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"content_type": "variants_regulatory_regions",
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"file_format": "bed",
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"href": "/reference-files/IGVFFI3392RQSD/@@download/IGVFFI3392RQSD.bed.gz",
"s3_uri": "s3://igvf-files/2023/11/30/fa203ea6-d731-4b88-b606-e67f6efc214f/IGVFFI3392RQSD.bed.gz",
"submitted_file_name": "ENCFF102ATL.bed.gz",
"upload_status": "validated"
},
{
"@id": "/reference-files/IGVFFI3609TLOA/",
"accession": "IGVFFI3609TLOA",
"aliases": [
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],
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"file_format": "bed",
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"href": "/reference-files/IGVFFI3609TLOA/@@download/IGVFFI3609TLOA.bed.gz",
"s3_uri": "s3://igvf-files/2023/11/30/e046d4d3-2e7a-4aba-b08c-84717f54ca45/IGVFFI3609TLOA.bed.gz",
"submitted_file_name": "ENCFF103XRK.bed.gz",
"upload_status": "validated"
},
{
"@id": "/reference-files/IGVFFI4945EHCA/",
"accession": "IGVFFI4945EHCA",
"aliases": [
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],
"assembly": "GRCh38",
"content_type": "variants_regulatory_regions",
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"file_format": "bed",
"file_size": 669629,
"href": "/reference-files/IGVFFI4945EHCA/@@download/IGVFFI4945EHCA.bed.gz",
"s3_uri": "s3://igvf-files/2023/11/30/080b9456-82f4-426e-ad1d-77907a2be6d1/IGVFFI4945EHCA.bed.gz",
"submitted_file_name": "ENCFF152EUY.bed.gz",
"upload_status": "validated"
},
{
"@id": "/reference-files/IGVFFI2543SBQC/",
"accession": "IGVFFI2543SBQC",
"aliases": [
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],
"assembly": "GRCh38",
"content_type": "variants_regulatory_regions",
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"file_format": "bed",
"file_size": 410113,
"href": "/reference-files/IGVFFI2543SBQC/@@download/IGVFFI2543SBQC.bed.gz",
"s3_uri": "s3://igvf-files/2023/11/30/a570439d-c7c2-4612-8077-bf370f0c9c02/IGVFFI2543SBQC.bed.gz",
"submitted_file_name": "ENCFF205ATR.bed.gz",
"upload_status": "validated"
},
{
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"accession": "IGVFFI2505DVUA",
"aliases": [
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],
"assembly": "GRCh38",
"content_type": "variants_regulatory_regions",
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"file_format": "bed",
"file_size": 633525,
"href": "/reference-files/IGVFFI2505DVUA/@@download/IGVFFI2505DVUA.bed.gz",
"s3_uri": "s3://igvf-files/2023/11/30/c2298b81-675a-4b3c-aed6-096013834e7f/IGVFFI2505DVUA.bed.gz",
"submitted_file_name": "ENCFF212WCH.bed.gz",
"upload_status": "validated"
},
{
"@id": "/reference-files/IGVFFI7770JDBK/",
"accession": "IGVFFI7770JDBK",
"aliases": [
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],
"assembly": "GRCh38",
"content_type": "variants_regulatory_regions",
"creation_timestamp": "2023-11-30T07:43:09.032683+00:00",
"file_format": "bed",
"file_size": 682870,
"href": "/reference-files/IGVFFI7770JDBK/@@download/IGVFFI7770JDBK.bed.gz",
"s3_uri": "s3://igvf-files/2023/11/30/4cebf560-1150-4dfe-a86f-1c546a6430fd/IGVFFI7770JDBK.bed.gz",
"submitted_file_name": "ENCFF277UAK.bed.gz",
"upload_status": "validated"
},
{
"@id": "/reference-files/IGVFFI9673DOVK/",
"accession": "IGVFFI9673DOVK",
"aliases": [
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],
"assembly": "GRCh38",
"content_type": "variants_regulatory_regions",
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"file_format": "bed",
"file_size": 164741,
"href": "/reference-files/IGVFFI9673DOVK/@@download/IGVFFI9673DOVK.bed.gz",
"s3_uri": "s3://igvf-files/2023/11/30/fc05a842-c714-42d7-9991-692a93241c1a/IGVFFI9673DOVK.bed.gz",
"submitted_file_name": "ENCFF319URR.bed.gz",
"upload_status": "validated"
},
{
"@id": "/reference-files/IGVFFI9155YFIJ/",
"accession": "IGVFFI9155YFIJ",
"aliases": [
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],
"assembly": "GRCh38",
"content_type": "variants_regulatory_regions",
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"file_format": "bed",
"file_size": 31997,
"href": "/reference-files/IGVFFI9155YFIJ/@@download/IGVFFI9155YFIJ.bed.gz",
"s3_uri": "s3://igvf-files/2023/11/30/efdb684b-deed-4519-b862-9f31eb88715e/IGVFFI9155YFIJ.bed.gz",
"submitted_file_name": "ENCFF347TTU.bed.gz",
"upload_status": "validated"
},
{
"@id": "/reference-files/IGVFFI5367FBUQ/",
"accession": "IGVFFI5367FBUQ",
"aliases": [
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],
"assembly": "GRCh38",
"content_type": "variants_regulatory_regions",
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"file_format": "bed",
"file_size": 619912,
"href": "/reference-files/IGVFFI5367FBUQ/@@download/IGVFFI5367FBUQ.bed.gz",
"s3_uri": "s3://igvf-files/2023/11/30/0358ef1e-949d-469e-8355-8df8caacf70f/IGVFFI5367FBUQ.bed.gz",
"submitted_file_name": "ENCFF352KHJ.bed.gz",
"upload_status": "validated"
},
{
"@id": "/reference-files/IGVFFI0637ZUVZ/",
"accession": "IGVFFI0637ZUVZ",
"aliases": [
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],
"assembly": "GRCh38",
"content_type": "variants_regulatory_regions",
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"file_format": "bed",
"file_size": 27170,
"href": "/reference-files/IGVFFI0637ZUVZ/@@download/IGVFFI0637ZUVZ.bed.gz",
"s3_uri": "s3://igvf-files/2023/11/30/0e081391-f86e-4f8c-ada2-9ba1c5ea191a/IGVFFI0637ZUVZ.bed.gz",
"submitted_file_name": "ENCFF426CPM.bed.gz",
"upload_status": "validated"
},
{
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"accession": "IGVFFI4973IJAM",
"aliases": [
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],
"assembly": "GRCh38",
"content_type": "variants_regulatory_regions",
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"file_format": "bed",
"file_size": 9159979,
"href": "/reference-files/IGVFFI4973IJAM/@@download/IGVFFI4973IJAM.bed.gz",
"s3_uri": "s3://igvf-files/2023/11/30/fbe4b427-8117-4c7d-9ce7-835a504ec3bb/IGVFFI4973IJAM.bed.gz",
"submitted_file_name": "ENCFF440SKS.bed.gz",
"upload_status": "validated"
},
{
"@id": "/reference-files/IGVFFI1454UUGM/",
"accession": "IGVFFI1454UUGM",
"aliases": [
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],
"assembly": "GRCh38",
"content_type": "variants_regulatory_regions",
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"file_format": "bed",
"file_size": 35421,
"href": "/reference-files/IGVFFI1454UUGM/@@download/IGVFFI1454UUGM.bed.gz",
"s3_uri": "s3://igvf-files/2023/11/30/f73dc3c4-48b0-4521-9806-1cec6f92e7ac/IGVFFI1454UUGM.bed.gz",
"submitted_file_name": "ENCFF524LHZ.bed.gz",
"upload_status": "validated"
},
{
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"accession": "IGVFFI2916XTBD",
"aliases": [
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],
"assembly": "GRCh38",
"content_type": "variants_regulatory_regions",
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"file_format": "bed",
"file_size": 66677,
"href": "/reference-files/IGVFFI2916XTBD/@@download/IGVFFI2916XTBD.bed.gz",
"s3_uri": "s3://igvf-files/2023/11/30/7747d9a0-7972-4c06-96c1-0684babb1262/IGVFFI2916XTBD.bed.gz",
"submitted_file_name": "ENCFF544XXM.bed.gz",
"upload_status": "validated"
},
{
"@id": "/reference-files/IGVFFI1013OWCN/",
"accession": "IGVFFI1013OWCN",
"aliases": [
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],
"assembly": "GRCh38",
"content_type": "variants_regulatory_regions",
"creation_timestamp": "2023-11-30T07:43:57.982279+00:00",
"file_format": "bed",
"file_size": 419485,
"href": "/reference-files/IGVFFI1013OWCN/@@download/IGVFFI1013OWCN.bed.gz",
"s3_uri": "s3://igvf-files/2023/11/30/f333d4ad-7363-4fce-b0ac-75b5ad8fd928/IGVFFI1013OWCN.bed.gz",
"submitted_file_name": "ENCFF874LKX.bed.gz",
"upload_status": "validated"
},
{
"@id": "/reference-files/IGVFFI0876BTBI/",
"accession": "IGVFFI0876BTBI",
"aliases": [
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],
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