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IGVFDS1580ZVOZ

released
File Set Type
genome
Summary
Homo sapiens GRCh38 GRCh38, mm10 GENCODE 32 GENCODE 32, GENCODE M23 GENCODE 44 genome
Description
Satpathy lab genome reference used in lab-internal cell ranger workflow
Taxa
Homo sapiens
Assemblies
GRCh38, GRCh38, mm10
Transcriptome Annotations
GENCODE 32, GENCODE 32, GENCODE M23, GENCODE 44
Aliases
ansuman-satpathy:genome-references-cell-ranger
Attribution
Ansuman Satpathy, Stanford

Files

4 items
fasta
genome reference
GRCh38, mm10 GENCODE 32, GENCODE M23 genome reference
Ansuman Satpathy, Stanford
1.7 GB
/Users/khine/Downloads/refdata-gex-GRCh38-and-mm10-2020-A-genome.fa.gz
validated
fasta
genome reference
GRCh38 GENCODE 32 genome reference
Ansuman Satpathy, Stanford
882 MB
/Users/khine/Downloads/refdata-cellranger-arc-GRCh38-2020-mtMask-genome.fa.gz
validated
fasta
genome reference
GRCh38, mm10 GENCODE 32, GENCODE M23 genome reference
Ansuman Satpathy, Stanford
1.7 GB
/Users/khine/Downloads/refdata-cellranger-atac-GRCh38-and-mm10-2020-A-2.0.0-genome.fa.gz
validated
fasta
genome reference
GRCh38 GENCODE 44 genome reference
Ansuman Satpathy, Stanford
882 MB
/Users/khine/Downloads/refdata-gex-GRCh38-2024-A-genome.fa.gz
validated