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IGVFDS3387GMPK

released
File Set Type
reporter library
Summary
reporter library targeting random selections genome-wide
Aliases
tim-reddy:starr-seq-construct-lib-P009
Attribution
Tim Reddy, Duke

Reporter Library Details

Library Construct Scope
genome-wide
Selection Criteria
random selections

Sequencing Results (Illumina)

2 items
Read Names
fastq
reads
R1
1
Read 1
AACNYKFM5
1
5.2 GB
Tim Reddy, Duke
validated
fastq
reads
R2
1
Read 2
AACNYKFM5
1
5.8 GB
Tim Reddy, Duke
validated

Integrated Content Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
vcf
variants
GRCh38 variants
Tim Reddy, Duke
2.5 GB
validated

File Sets Using This Construct Library Set as an Input

1 item
Accession
Type
Summary
Aliases
Lab
AnalysisSet
SUPERSTARR: alignments, index, reporter genomic variant effects, reporter variants
  • tim-reddy:starr-seq-principal-analysis-set-k562-P009
Tim Reddy, Duke

Applied to Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
Homo sapiens (female) K562 cell line transfected with a reporter library

Documents

1 item
Page
Description
Type
Download
Preview
STARR-seq ORI plasmid map (pre-cloning)
plasmid map