IGVFDS2023ZEFC

{
    "@context": "/terms/",
    "@id": "/construct-library-sets/IGVFDS2023ZEFC/",
    "@type": [
        "ConstructLibrarySet",
        "FileSet",
        "Item"
    ],
    "accession": "IGVFDS2023ZEFC",
    "aliases": [
        "charles-gersbach:construct-library-set-crispri-region3-ipsc-cm-targeted-hicar"
    ],
    "applied_to_samples": [
        {
            "@id": "/in-vitro-systems/IGVFSM5947VCGI/",
            "@type": [
                "InVitroSystem",
                "Biosample",
                "Sample",
                "Item"
            ],
            "accession": "IGVFSM5947VCGI",
            "aliases": [
                "charles-gersbach:in-vitro-system-crispri-region3-ipsc-cm-targeted-hicar-rep1"
            ],
            "classifications": [
                "differentiated cell specimen"
            ],
            "donors": [
                {
                    "@id": "/human-donors/IGVFDO3212TBUN/",
                    "status": "released",
                    "taxa": "Homo sapiens"
                }
            ],
            "sample_terms": [
                {
                    "@id": "/sample-terms/EFO_0009747/",
                    "status": "released",
                    "term_name": "GM25256 (WTC-11)"
                }
            ],
            "status": "released",
            "summary": "GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 42 days, male, Homo sapiens transfected with a guide library",
            "targeted_sample_term": {
                "@id": "/sample-terms/CL_0000746/",
                "status": "released",
                "term_name": "cardiac muscle cell"
            }
        },
        {
            "@id": "/in-vitro-systems/IGVFSM2124WYGG/",
            "@type": [
                "InVitroSystem",
                "Biosample",
                "Sample",
                "Item"
            ],
            "accession": "IGVFSM2124WYGG",
            "aliases": [
                "charles-gersbach:in-vitro-system-crispri-region3-ipsc-cm-targeted-hicar-rep2"
            ],
            "classifications": [
                "differentiated cell specimen"
            ],
            "donors": [
                {
                    "@id": "/human-donors/IGVFDO3212TBUN/",
                    "status": "released",
                    "taxa": "Homo sapiens"
                }
            ],
            "sample_terms": [
                {
                    "@id": "/sample-terms/EFO_0009747/",
                    "status": "released",
                    "term_name": "GM25256 (WTC-11)"
                }
            ],
            "status": "released",
            "summary": "GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 42 days, male, Homo sapiens transfected with a guide library",
            "targeted_sample_term": {
                "@id": "/sample-terms/CL_0000746/",
                "status": "released",
                "term_name": "cardiac muscle cell"
            }
        }
    ],
    "audit": {
        "WARNING": [
            {
                "category": "missing files",
                "detail": "Construct library set [IGVFDS2023ZEFC](/construct-library-sets/IGVFDS2023ZEFC/) has no `files`. File sets are expected to have files.",
                "level": 40,
                "level_name": "WARNING",
                "name": "audit_no_files",
                "path": "/construct-library-sets/IGVFDS2023ZEFC/"
            }
        ]
    },
    "award": {
        "@id": "/awards/HG012053/",
        "component": "functional characterization"
    },
    "control_file_sets": [
        "/construct-library-sets/IGVFDS0240VMGW/"
    ],
    "control_for": [],
    "creation_timestamp": "2024-10-22T14:44:36.941228+00:00",
    "description": "cardiac-myosin-enhancer (library-set-human-hicar-probe-library)",
    "documents": [
        "/documents/2ee09c97-83f8-4c26-b51b-30fd7335bf21/"
    ],
    "file_set_type": "guide library",
    "files": [],
    "guide_type": "sgRNA",
    "input_for": [],
    "integrated_content_files": [
        {
            "@id": "/tabular-files/IGVFFI0432FLWT/",
            "accession": "IGVFFI0432FLWT",
            "aliases": [
                "charles-gersbach:tabular-file-human_crispri_region3"
            ],
            "content_type": "guide RNA sequences",
            "file_format": "tsv",
            "status": "released",
            "upload_status": "validation exempted"
        }
    ],
    "lab": {
        "@id": "/labs/charles-gersbach/",
        "title": "Charles Gersbach, Duke"
    },
    "release_timestamp": "2024-12-13T19:43:33.031595+00:00",
    "schema_version": "10",
    "scope": "loci",
    "selection_criteria": [
        "accessible genome regions"
    ],
    "small_scale_loci_list": [
        {
            "assembly": "GRCh38",
            "chromosome": "chr14",
            "end": 23380236,
            "start": 23380217
        }
    ],
    "status": "released",
    "submitted_by": {
        "@id": "/users/3782ce69-0e9f-4b46-91f9-4578139785c7/",
        "title": "Ruhi Rai"
    },
    "summary": "guide (sgRNA) library targeting accessible genome regions in a genomic locus",
    "uuid": "924101d8-8999-4399-b74e-3ed52bee9432"
}