Home

IGVFDS8781ZUPM

released
File Set Type
cell sorting
Summary
cell sorting for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci, mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci, ... and 4 more measurement sets
Aliases
jesse-engreitz:auxiliary_sortparams_CRUDO_KITLG-Auxin6hrs-FF2

Tabular Files

1 item
Accession
File Format
Content Type
Lab
File Size
Upload Status
tsv
sample sort parameters
Jesse Engreitz, Stanford
492 B
validated

Samples

6 items
Sample Terms
Summary
InVitroSystem
HCT116 cell line, male, Homo sapiens (sorting details: FACS bin E for 80-90% expression of KITLG) treated with 1 μM 5-Phenyl-1H-indole-3-acetic acid for 6 hours, modified with a guide library
InVitroSystem
HCT116 cell line, male, Homo sapiens (sorting details: FACS bin F for 80-100% expression of KITLG) treated with 1 μM 5-Phenyl-1H-indole-3-acetic acid for 6 hours, modified with a guide library
InVitroSystem
HCT116 cell line, male, Homo sapiens (sorting details: FACS bin C for 35-45% expression of KITLG) treated with 1 μM 5-Phenyl-1H-indole-3-acetic acid for 6 hours, modified with a guide library
InVitroSystem
HCT116 cell line, male, Homo sapiens (sorting details: FACS bin A for 0-10% expression of KITLG) treated with 1 μM 5-Phenyl-1H-indole-3-acetic acid for 6 hours, modified with a guide library
InVitroSystem
HCT116 cell line, male, Homo sapiens (sorting details: FACS bin D for 55-65% expression of KITLG) treated with 1 μM 5-Phenyl-1H-indole-3-acetic acid for 6 hours, modified with a guide library
InVitroSystem
HCT116 cell line, male, Homo sapiens (sorting details: FACS bin B for 10-20% expression of KITLG) treated with 1 μM 5-Phenyl-1H-indole-3-acetic acid for 6 hours, modified with a guide library

Donors

1 item
Accession
Aliases
Sex
Taxa
  • igvf:donor_of_HCT116
male
Homo sapiens

Related Measurement Sets

6 items
MeasurementSet
mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
  • jesse-engreitz:measurement_CRUDO_KITLG-Auxin6hrs-FF2-BinE-PCR1_S65
  • jesse-engreitz:measurement_CRUDO_KITLG-Auxin6hrs-FF2-BinE-PCR2_S71
  • jesse-engreitz:measurement_CRUDO_KITLG-Auxin6hrs-FF2-BinE-PCR3_S161
  • jesse-engreitz:measurement_CRUDO_KITLG-Auxin6hrs-FF2-BinE-PCR4_S167
Jesse Engreitz, Stanford
MeasurementSet
mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
  • jesse-engreitz:measurement_CRUDO_KITLG-Auxin6hrs-FF2-BinB-PCR1_S62
  • jesse-engreitz:measurement_CRUDO_KITLG-Auxin6hrs-FF2-BinB-PCR2_S68
  • jesse-engreitz:measurement_CRUDO_KITLG-Auxin6hrs-FF2-BinB-PCR3_S158
  • jesse-engreitz:measurement_CRUDO_KITLG-Auxin6hrs-FF2-BinB-PCR4_S164
Jesse Engreitz, Stanford
MeasurementSet
mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
  • jesse-engreitz:measurement_CRUDO_KITLG-Auxin6hrs-FF2-BinD-PCR1_S64
  • jesse-engreitz:measurement_CRUDO_KITLG-Auxin6hrs-FF2-BinD-PCR2_S70
  • jesse-engreitz:measurement_CRUDO_KITLG-Auxin6hrs-FF2-BinD-PCR3_S160
  • jesse-engreitz:measurement_CRUDO_KITLG-Auxin6hrs-FF2-BinD-PCR4_S166
Jesse Engreitz, Stanford
MeasurementSet
mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
  • jesse-engreitz:measurement_CRUDO_KITLG-Auxin6hrs-FF2-BinF-PCR1_S66
  • jesse-engreitz:measurement_CRUDO_KITLG-Auxin6hrs-FF2-BinF-PCR2_S72
  • jesse-engreitz:measurement_CRUDO_KITLG-Auxin6hrs-FF2-BinF-PCR3_S162
  • jesse-engreitz:measurement_CRUDO_KITLG-Auxin6hrs-FF2-BinF-PCR4_S168
Jesse Engreitz, Stanford
MeasurementSet
mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
  • jesse-engreitz:measurement_CRUDO_KITLG-Auxin6hrs-FF2-BinC-PCR1_S63
  • jesse-engreitz:measurement_CRUDO_KITLG-Auxin6hrs-FF2-BinC-PCR2_S69
  • jesse-engreitz:measurement_CRUDO_KITLG-Auxin6hrs-FF2-BinC-PCR3_S159
  • jesse-engreitz:measurement_CRUDO_KITLG-Auxin6hrs-FF2-BinC-PCR4_S165
Jesse Engreitz, Stanford
MeasurementSet
mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci
  • jesse-engreitz:measurement_CRUDO_KITLG-Auxin6hrs-FF2-BinA-PCR1_S61
  • jesse-engreitz:measurement_CRUDO_KITLG-Auxin6hrs-FF2-BinA-PCR2_S67
  • jesse-engreitz:measurement_CRUDO_KITLG-Auxin6hrs-FF2-BinA-PCR3_S157
  • jesse-engreitz:measurement_CRUDO_KITLG-Auxin6hrs-FF2-BinA-PCR4_S163
Jesse Engreitz, Stanford

Attribution

Award
HG011972
Principal Investigator(s)
Contact P.I.
Jesse Engreitz
Lab
Jesse Engreitz, Stanford