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{
"category": "missing file format specifications",
"detail": "Tabular file [IGVFFI5841PKJL](/tabular-files/IGVFFI5841PKJL/) has no `file_format_specifications`. Tabular files are expected to link to a file format specifications document describing the headers of the file.",
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{
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{
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{
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}
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{
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"Item"
],
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"igvf:HCT116"
],
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}
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{
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"Sample",
"Item"
],
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}
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{
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],
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}
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{
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"Item"
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],
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{
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}
]
},
{
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"Biosample",
"Sample",
"Item"
],
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"jesse-engreitz:in-vitro-system_CRUDO_CCND1_Auxin6hrs-FF1-BinD-PCR3-Rep1_S286",
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},
{
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}
],
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{
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"@type": [
"SampleTerm",
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"Item"
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],
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"term_name": "HCT116"
}
],
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"treatments": [
{
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"status": "released",
"treatment_term_name": "5-Phenyl-1H-indole-3-acetic acid"
}
]
},
{
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"InVitroSystem",
"Biosample",
"Sample",
"Item"
],
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"jesse-engreitz:in-vitro-system_CRUDO_CCND1_Auxin6hrs-FF1-BinE-PCR3-Rep1_S287",
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],
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{
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},
{
"@id": "/crispr-modifications/8543fa06-1720-4e7d-8e8f-7e24c1b1cf79/",
"modality": "interference",
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],
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{
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"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
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"igvf:HCT116"
],
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}
],
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{
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}
]
},
{
"@id": "/in-vitro-systems/IGVFSM7718ZYYQ/",
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"InVitroSystem",
"Biosample",
"Sample",
"Item"
],
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"aliases": [
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"jesse-engreitz:in-vitro-system_CRUDO_CCND1_Auxin6hrs-FF1-BinF-PCR3-Rep1_S288",
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],
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{
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],
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"term_name": "HCT116"
}
],
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"summary": "HCT116 cell line, male, Homo sapiens (sorting details: FACS bin F for 80-100% expression of CCND1) treated with 1 μM 5-Phenyl-1H-indole-3-acetic acid for 6 hours, modified with AID system targeting RAD21, CRISPRi Sp-dCas9-KOX1-KRAB, transfected with a guide library",
"taxa": "Homo sapiens",
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{
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"status": "released",
"treatment_term_name": "5-Phenyl-1H-indole-3-acetic acid"
}
]
}
],
"schema_version": "12",
"status": "released",
"submitted_by": {
"@id": "/users/100f06c6-83a7-4b4d-9dfd-053a1829773b/",
"title": "Benjamin Doughty"
},
"submitted_files_timestamp": "2024-07-03T00:35:20.993427+00:00",
"summary": "cell sorting for mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci, mixed CRISPR FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci, ... and 4 more measurement sets",
"uuid": "80aa9c5e-ec93-4ab0-b6d5-8caff27729cf"
}