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IGVFDS6655SGOR

revoked
File Set Type
gRNA sequencing
Summary
gRNA sequencing
Aliases
jesse-engreitz:auxiliary_CRUDO_SSFA2-Auxin6hrs-FF1-BinC-PCR1-Rep1_S27
jesse-engreitz:auxiliary_CRUDO_SSFA2-Auxin6hrs-FF1-BinC-PCR2-Rep1_S33
jesse-engreitz:auxiliary_CRUDO_SSFA2-Auxin6hrs-FF1-BinC-PCR3-Rep1_S81
jesse-engreitz:auxiliary_CRUDO_SSFA2-Auxin6hrs-FF1-BinC-PCR4-Rep1_S87
Revoke Detail
This auxiliary set has been revoked as its files have been moved to the measurement set: /measurement-sets/IGVFDS8837KFKM/

Other Raw Data Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI6949YOXY
Jesse Engreitz, Stanford
914 B
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
HCT116 cell line, male, Homo sapiens (sorting details: FACS bin C for 35-45% expression of SSFA2) treated with 1 μM 5-Phenyl-1H-indole-3-acetic acid for 6 hours, modified with AID system targeting RAD21, CRISPRi Sp-dCas9-KOX1-KRAB, transfected with a guide library

Donors

1 item
Accession
Aliases
Sex
Taxa
  • igvf:donor_of_HCT116
male
Homo sapiens

Associated Construct Library Sets

1 item
Accession
Summary
Library Design Files
guide (sgRNA) library targeting accessible genome regions in many genomic loci

Attribution

Award
HG011972
Principal Investigator(s)
Contact P.I.
Jesse Engreitz
Lab
Jesse Engreitz, Stanford