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AuxiliarySet
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IGVFDS6433JKUR
IGVFDS6433JKUR
released
Json view
File Set Type
quantification DNA barcode sequencing
Summary
quantification DNA barcode sequencing for lentiMPRA integrating a reporter library targeting candidate cis-regulatory elements genome-wide
Description
HEK293T DNA count data of replicate 1
Submitter Comment
rep1
Attribution
Nadav Ahituv, UCSF
(
HG011966
—
Jay Shendure
)
Sequencing Results (Illumina)
12 items
1
2
Accession
File Format
Content Type
Illumina Read Type
Sequencing Run
Read Names
Associated seqspec Files
Sequence Specification Document
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0502IWHU
fastq
reads
R2
5
UMI
IGVFFI5900RDDY
Illumina NextSeq 500
30 MB
Nadav Ahituv, UCSF
validated
IGVFFI1112FCCP
fastq
reads
R2
6
UMI
IGVFFI5900RDDY
Illumina NextSeq 500
607 MB
Nadav Ahituv, UCSF
validated
IGVFFI3079XQNL
fastq
reads
R1
6
Barcode forward
IGVFFI5900RDDY
Illumina NextSeq 500
575 MB
Nadav Ahituv, UCSF
validated
IGVFFI4073RBEH
fastq
reads
R3
6
Barcode reverse
IGVFFI5900RDDY
Illumina NextSeq 500
579 MB
Nadav Ahituv, UCSF
validated
IGVFFI4239VWVU
fastq
reads
R3
3
Barcode reverse
IGVFFI5900RDDY
Illumina NextSeq 500
807 MB
Nadav Ahituv, UCSF
validated
IGVFFI5550ERUF
fastq
reads
R2
4
UMI
IGVFFI5900RDDY
Illumina NextSeq 500
58 MB
Nadav Ahituv, UCSF
validated
IGVFFI5696TVWE
fastq
reads
R2
3
UMI
IGVFFI5900RDDY
Illumina NextSeq 500
851 MB
Nadav Ahituv, UCSF
validated
IGVFFI7430OIYQ
fastq
reads
R3
5
Barcode reverse
IGVFFI5900RDDY
Illumina NextSeq 500
29 MB
Nadav Ahituv, UCSF
validated
IGVFFI7885EZPH
fastq
reads
R3
4
Barcode reverse
IGVFFI5900RDDY
Illumina NextSeq 500
55 MB
Nadav Ahituv, UCSF
validated
IGVFFI8189BJZT
fastq
reads
R1
4
Barcode forward
IGVFFI5900RDDY
Illumina NextSeq 500
55 MB
Nadav Ahituv, UCSF
validated
Related Measurement Sets
1 item
Accession
Type
Summary
Aliases
Lab
IGVFDS3972PWZA
MeasurementSet
lentiMPRA integrating a reporter library targeting candidate cis-regulatory elements genome-wide
Nadav Ahituv, UCSF
File Sets Using This Auxiliary Set as an Input
1 item
Accession
Type
Summary
Aliases
Lab
IGVFDS2308SBSR
AnalysisSet
lentiMPRA integrating a reporter library targeting candidate cis-regulatory elements genome-wide
Nadav Ahituv, UCSF