Home

IGVFDS4972ICEM

preview
This object is in preview status. Metadata is subject to change until this object is released.
File Set Type
gRNA sequencing
Summary
gRNA sequencing for CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting genes in many genomic loci
Aliases
jesse-engreitz:auxiliary_sets-scRNAseq_2kG_2PMDox2_3

Sequencing Results (Illumina)

4 items
fastq
reads
R1
1
324 MB
Jesse Engreitz, Stanford
validated
fastq
reads
R2
2
391 MB
Jesse Engreitz, Stanford
validated
fastq
reads
R2
1
374 MB
Jesse Engreitz, Stanford
validated
fastq
reads
R1
2
412 MB
Jesse Engreitz, Stanford
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
TeloHAEC cell line, female, Homo sapiens modified with CRISPRi Sp-dCas9-KOX1-KRAB, transfected with a guide library

Donors

1 item
Accession
Aliases
Sex
Taxa
  • igvf:donor_of_teloHAEC
female
Homo sapiens

Related Measurement Sets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting genes in many genomic loci
  • jesse-engreitz:measurement_set-scRNAseq_2kG_2PMDox2_3
Jesse Engreitz, Stanford

File Sets Using This Auxiliary Set as an Input

1 item
Accession
Type
Summary
Aliases
Lab
AnalysisSet
interference Perturb-seq
  • jesse-engreitz:analysis_set_TeloHAEC_Perturb-seq_2kG
Jesse Engreitz, Stanford

Attribution

Award
HG011972
Principal Investigator(s)
Contact P.I.
Jesse Engreitz
Lab
Jesse Engreitz, Stanford